Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0802 ATGCATAGGAATCACGTAAAGATGGAAAGAAAGATAGTGCGTGTGCACATATGCACTATAATTTCCCACCTTATAATAAACCAGTCCACTTTCAAAATCCCACCAATTCTCAGTATCTGTCTTCCAGATATTTCTGCTTCTGGAACCCCATTTTCAGAAGACATCCATGTCCCAAGTTCTATAAAGCCTCCCAACTCTAGCACAAGATTTCATCTCAGCAACTTAACCAGCTTTTCTCTGTCAGAACATTGCTGGGCTGCTACTATTCTTAAGATGAGCTACACGGGACGTGATTGGCTGTGTGGTGCTTGTCAGCATGTTAATTTTAGGAGGAGAGATGCATGCCAACGTTGTGGGTATCCCAAGGTTGGAGGTAGTGATCAGTATTCAACCTGTGAAAGCAATAGGAACAGTGAAGGATTGCCAGGAGACTGGTTTTGCAGTGCTGACAACTGCGGAGCTCACAACTACGCGAGCCGATCGAGATGCTTTAGATGTTGTTCTCTCAAAGATGACAATGATGGTGGCTCTGATAGATATGGACTTACTAACAACTTGCCCCCACCAGGATGGAAGACTGGTGATTGGATGTGCTCTAGCTGTGGAGCGCATAACTATGCTTGTAGGGAAGAATGCTTCAAGTGCAAAACACCAAATGCTTATGGTGAGAAAAGTTTAGTTACTGATGGTGATTGCATCGAAAGGGAAAATAAAGTGTTGTTCAATGCTAGTTTTTCCTTGACACGTTCATAA 753 0.4316 MHRNHVKMERKIVRVHICTIISHLIINQSTFKIPPILSICLPDISASGTPFSEDIHVPSSIKPPNSSTRFHLSNLTSFSLSEHCWAATILKMSYTGRDWLCGACQHVNFRRRDACQRCGYPKVGGSDQYSTCESNRNSEGLPGDWFCSADNCGAHNYASRSRCFRCCSLKDDNDGGSDRYGLTNNLPPPGWKTGDWMCSSCGAHNYACREECFKCKTPNAYGEKSLVTDGDCIERENKVLFNASFSLTRS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0802 250 ProSiteProfiles Zinc finger RanBP2 type profile. 141 172 IPR001876 -
Lele17g0802 250 ProSiteProfiles Zinc finger RanBP2 type profile. 94 124 IPR001876 -
Lele17g0802 250 ProSitePatterns Zinc finger RanBP2-type signature. 196 215 IPR001876 -
Lele17g0802 250 Gene3D - 188 221 - -
Lele17g0802 250 Gene3D - 92 124 - -
Lele17g0802 250 Gene3D - 132 172 - -
Lele17g0802 250 PANTHER ZINC FINGER PROTEIN 136 220 - -
Lele17g0802 250 SUPERFAMILY Ran binding protein zinc finger-like 93 125 IPR036443 -
Lele17g0802 250 ProSiteProfiles Zinc finger RanBP2 type profile. 192 221 IPR001876 -
Lele17g0802 250 ProSitePatterns Zinc finger RanBP2-type signature. 145 166 IPR001876 -
Lele17g0802 250 SUPERFAMILY Ran binding protein zinc finger-like 138 173 IPR036443 -
Lele17g0802 250 SMART zf_4 97 121 IPR001876 -
Lele17g0802 250 SMART zf_4 194 218 IPR001876 -
Lele17g0802 250 SMART zf_4 143 169 IPR001876 -
Lele17g0802 250 ProSitePatterns Zinc finger RanBP2-type signature. 99 118 IPR001876 -
Lele17g0802 250 Pfam Zn-finger in Ran binding protein and others 192 219 IPR001876 -
Lele17g0802 250 Pfam Zn-finger in Ran binding protein and others 142 170 IPR001876 -
Lele17g0802 250 SUPERFAMILY Ran binding protein zinc finger-like 189 220 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0802 Lele-ChrLele17 19521245 19522314 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0802 17 19521245 19522314 Lele20g0695 20 14078460 14081818 hybridization