Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1101 ATGGCCGCCTCGATCTTTCTCCTTTACATGATGGCTTTTTCTTTGCTGCAATATGCATCATCCTCGTCTATGTGTCATCACGACTCTGCTTTATTTCTTTATAGTCTTAAATCTCAATGCCCTCTGTCGATCTCGCCAAATCCACCTCTTCAGGTGGATGGGAGTTACATAGAAGGAGTCTTGTCTAGAAAGCAGGGAATCGGATATATTTCTGTACTTTTCTATGCTTCTTGGTGCCCAGTTTCTCTGAGTGTGCTTCCTAAACTTGAAACACTTAGTTCTATATTTCCTCAAGTGGAACATTTGGTAGTTGAGCAATCATCAACCTTGCCAAGCATATTTTCGAGATATGGAATCCATAGCGTGCCAGCTATATTACTGGTGAATCAGACATCAATGATCAGATACCATGGTCCAAAAGATCTTCTCTCCCTTGTACAATTTTATGAGAGAAACACAGGATTTGGGCCAATTCAGTACTTTGCGGACGACCAAGAGAACAGCCTGAGCAGTGACAAAAAATCAGATATAAAGTCATTGATCAGTTTATCACCAAAAGAAATATGTAGCAGGGAACCTTACCTGGTTTTCTCAGTATTGTTTCTTTGTTTGAGGATACTTCTCTATGTGTTGCCGGGCATTTTAGCGCATCTCAGGGCATTCTGGGCGTCCTATGTTCCACATCTGAACTTGCAAATATTTGGTGAGACAAGCCAAGTGATGGGACGCATTCTTCAAGTGATGGATGTCAGGAGGATTTGGACGAAACTAAGACTGAGCAAGACGAGGAGCTTCCATCAACGGGCAAAGAGTGCTAGAGTTTGGGCTTCGTCTCTGGCTTCGGTTTCTCTGGGCGAGTCATCATCAGCAAAGACATCCTCTTGA 885 0.4294 MAASIFLLYMMAFSLLQYASSSSMCHHDSALFLYSLKSQCPLSISPNPPLQVDGSYIEGVLSRKQGIGYISVLFYASWCPVSLSVLPKLETLSSIFPQVEHLVVEQSSTLPSIFSRYGIHSVPAILLVNQTSMIRYHGPKDLLSLVQFYERNTGFGPIQYFADDQENSLSSDKKSDIKSLISLSPKEICSREPYLVFSVLFLCLRILLYVLPGILAHLRAFWASYVPHLNLQIFGETSQVMGRILQVMDVRRIWTKLRLSKTRSFHQRAKSARVWASSLASVSLGESSSAKTSS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1101 294 Pfam Thioredoxin 72 148 IPR013766 -
Lele15g1101 294 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 2 293 IPR044794 -
Lele15g1101 294 Gene3D Glutaredoxin 49 155 - -
Lele15g1101 294 SUPERFAMILY Thioredoxin-like 35 151 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1101 Lele-ChrLele15 6381988 6385459 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0514 06 3115968 3116976 Lele15g1101 15 6381988 6385459 CCT
Lele07g0723 07 4083905 4084909 Lele15g1101 15 6381988 6385459 CCT
Lele08g0520 08 3160339 3161343 Lele15g1101 15 6381988 6385459 CCT
Lele05g0686 05 4036988 4048947 Lele15g1101 15 6381988 6385459 CCT
Lele13g1344 13 23378770 23382189 Lele15g1101 15 6381988 6385459 hybridization
Lele14g1251 14 21704044 21707583 Lele15g1101 15 6381988 6385459 hybridization