Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0722 ATGAGAAATTACACCTTACTGTGTGCTTTAATGGCACTTGCTGTCACTTGCTCTCTTCACTTTCATGCTCAGGCTGCTCCTGCTGGACCATTGATTAAGCATATTTCTTCATTTCTCAAATGGACGAGGTCTGCCTCTAAGACGCCTCAGTCAGATGGAAATGTTCTTCAATTCGAGAATGGTTACGTTGTTGAGACCGTGGCGGAAGGAAACGAGATTGGGGTCATTCCTTATCGGATTCGTGTCTCTGAGGACGGTGAACTCTTCGCTGTTGATTCAATAAATAGTAACATTGTGCGAATTACGCCACCATTGTCCCAGTATAGTAGAGGAAGGTTGGTGGCTGGGTCATTTCAGGGTTACACTGGACATGTTGACGGGAAACCAAGTGATGCTCGTTTTAATCATCCCAGAGGCATCACCATGGATGATAAAGGGAATGTTTATGTTGCAGATACTCAGAATCTGGCCATCAGAAAGATTGGAGATACTGGTGTGACAACCATCGCTGGAGGAAAGTCAAATGTAGTAGGCTACAGAGATGGCCCCAGTGAGGATGCTAAGTTCTCAAATGATTTTGACGTGGTTTATGTTCGGCCAACTTGCTCCTTATTGGTCATTGATAGAGGAAATGCTGCTCTTAGGCAAATATCCCTCAACCAGGAGGATTGTGATTACCAAAATAGTTCTATTTCAACTACAGATATTCTTACAGTTGTTGGTGCTGTCATAGTAGGATATGCCACAGGCATCCTGCAGCAAGGAATTGGCTCCTCTTTCTTCTCCAAGACGCAACGGTCAGAAGGAGAATTCGAAGGCCAAGCAAACAATGAAAAACCTATGTCCATATTAGCGAGTGGTAAAGATGAGCCAGGATGGCCATCTTTTGGACAGCTTTTCATTGATCTTTCTAAGCTTTCCCTTGAAACAGTGGTTAGTGCATTCTATCAGTTCATACCTTCACGTTTCCGATCTGATGGCCCCCCGAGAGGCCTCACACCTTTAAAAGATCATCTTCAGATGCCTGAAGAAGAAGCAGAGCCCCCATTGGTACATAGGCAGAGTGCTGCTGCTCCTATTATTGAGAATAGACAGATCCACACACCAAACACAGCTGAGAAATATTCGGAGTCGAAGCCCCACAAATTGAAATCAAGCAGTTTCAAGGATCCCTCCTTATCCAGCAAGCACCGATCATCAAAACGACAGGAATATGCTGAATTCTATGGATCGAGTGAGATTCCACCTTACATCAAATCAAAGAGCCAAAAGGAAAGGTCCAGACATCGGCAACGAGAGAAGAGCGGAGAAGTGGTTTATGGGGCAGTTGGAGCAGCAGAGGCAAAACCTGTTGAGATGAAAGCAGTTGATTATGACAATCCAAAGTTTGATCATTATAATTTGAGGACTAAGTACATACCTGGAGAGGCCTTCCGTTTCAACCCCCAGGGATAG 1455 0.446 MRNYTLLCALMALAVTCSLHFHAQAAPAGPLIKHISSFLKWTRSASKTPQSDGNVLQFENGYVVETVAEGNEIGVIPYRIRVSEDGELFAVDSINSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPRGITMDDKGNVYVADTQNLAIRKIGDTGVTTIAGGKSNVVGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLNQEDCDYQNSSISTTDILTVVGAVIVGYATGILQQGIGSSFFSKTQRSEGEFEGQANNEKPMSILASGKDEPGWPSFGQLFIDLSKLSLETVVSAFYQFIPSRFRSDGPPRGLTPLKDHLQMPEEEAEPPLVHRQSAAAPIIENRQIHTPNTAEKYSESKPHKLKSSSFKDPSLSSKHRSSKRQEYAEFYGSSEIPPYIKSKSQKERSRHRQREKSGEVVYGAVGAAEAKPVEMKAVDYDNPKFDHYNLRTKYIPGEAFRFNPQG 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0722 484 MobiDBLite consensus disorder prediction 359 439 - -
Lele12g0722 484 Pfam NHL repeat 134 160 IPR001258 GO:0005515
Lele12g0722 484 PANTHER - 28 471 - -
Lele12g0722 484 Gene3D - 38 219 IPR011042 -
Lele12g0722 484 SUPERFAMILY NHL repeat 55 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0722 Lele-ChrLele12 15367290 15370892 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0722 12 15367290 15370892 Lele12g0722 12 15367290 15370892 ECH
Lele09g0601 09 4590843 4601585 Lele12g0722 12 15367290 15370892 hybridization
Lele10g0550 10 4036275 4040108 Lele12g0722 12 15367290 15370892 hybridization