Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0642 ATGGCTTCCAAGCTCGTAATCATCATAGTCTTCATCTTTGACTTGATAGCTTTTGGGCTTGCTGTAGCAGCTGAGCAGAGAAGAAGCAAGGCCAAGGTTGTTCGTGACGGCGATTACAATTATGATTACTGTCGCTATGATTCTGATATAGCAACTGGTTTTGGTGCGGGTGCATTTCTGTTCCTTCTGATCAGTCAAATCCTCATAATGGTGGCAAGCCGTTGCTTCTGTTGCGGGAAGCCTCTGAGCCCCGGAGGTTCAAGAGCCTGTGCAATAATCCTTTTCTTAATCTGCTGGTTGTGTTTCTTCGTAGCCGAGATATGCTTGTTGGCAGGATCAGTGAGGAATGCTTATCACACAAGGTACCACACATTCTCTGACATCGACCCGATTTCTTGCGCAACACTTCGGAAGGGAGTTTTTGCTGCAGGTGCTGCTTTCATCCTCTTCACTGCCATAGTCTCAGAGTTCTATTATGTCAGCTATTCAAAGGCCAGGGACAGCTTCCTACCATATGCTGGCCGGGAAACTGGTGTGGGTATGAGAACCTACAAGTAA 558 0.4695 MASKLVIIIVFIFDLIAFGLAVAAEQRRSKAKVVRDGDYNYDYCRYDSDIATGFGAGAFLFLLISQILIMVASRCFCCGKPLSPGGSRACAIILFLICWLCFFVAEICLLAGSVRNAYHTRYHTFSDIDPISCATLRKGVFAAGAAFILFTAIVSEFYYVSYSKARDSFLPYAGRETGVGMRTYK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0642 185 Pfam Protein of unknown function (DUF1218) 58 153 IPR009606 -
Lele12g0642 185 PANTHER OS07G0462200 PROTEIN-RELATED 6 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0642 Lele-ChrLele12 14768958 14770578 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0642 12 14768958 14770578 Lele12g0642 12 14768958 14770578 ECH
Lele09g0686 09 5214871 5216128 Lele12g0642 12 14768958 14770578 hybridization
Lele10g0625 10 4606705 4610767 Lele12g0642 12 14768958 14770578 hybridization