Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0638 ATGGCCGATCGTTTCTTCCCTAACGAAATGCCAAACTTCGTAGCAGAGACAGCTGTTGGGGGAACTTCCTCTCAAGAAGCAAGAGACTCACTCACGAATCTCCTCTCTCTTCCTTACCCAACCTTCTCTACGAAGCTCCAAAAAGCAGCCTTGGACTTGAAAGAATCAGTTGTGAGGGAGACATGGGGATCGAGTGGGAAACGCGTGAAGGATTATACTCTGTACACGGGGGCTCTAGGAACAGCGTACCTGCTATTTAAAGCTTATCAAGTTACGAAGAATAGCAATGATCTTAGTTTATGCTCACAGATCATTAAGGCATGTGATTCTGCTTCAATAGATTCTAGCCGAATCACATTTTTATGTGGGCGTGCTGGTGTTTGTGCTCTTGGTGCTGTCATAGCTAAGCATATGGGAGATGAAAGGCTCCTTAACACTTACTTAGGACAATTCAAAAAGATCAGACGACCGCACGATTTGCCCTATGAGTTACTGTATGGCCGAGCAGGGTATTTATGGGCTTGTTCATTCTTAAACAAGCACATTGGCAAAGATACAATATCTACTACTGACATGAAACCAATCGTGGATGAAGTTATTGCAGCTGGCAGACAATTGGCCCTCGGTGGAAGATGTCCTCTAATGTATGAATGGCATGGCAAGAAATACTGGGGTGCTGCCCATGGACTAGCAGGAATAATGTATGTTTTAATGGACTTTGAACTAAATCCAGATGAGGTAGAAGATGTCAAGGGTACATTACGGTACATGATTAAAAATCGTTTCCCTAGTGGCAATTATCGCTCAAGTGAAGAAAACAACTCCGACCGTCTTGTGCATTGGTGTCATGGTGCTCCTGGAATCGCTCTTACTCTTGTAAAGGCAGCTGAGGTTTTTGGGGACAAGGAATTTGTGCAGGCAGCAACAGATGCAGGGGAAGTAGCGTGGAATAGGGGTCTGCTTAAGCGAGTTGGGATCTGCCATGGCATCAGTGGCAACACCTACGTCTTTCTTTCTCTGTACCGGTTAACAGGAAATCCTGAATACTTGTACAGGGCTAAAGCATTTGCTTGCTTTCTACTTGATAGAGCGCACAAACTGATCATGGAAGGAAAGATGCATGGCGGAGATCGCCCTTATTCATTGTTTGAAGGTCTTGGAGGAATGGCTTATATCTTTCTAGACATGATCGATCCTAAAGTGGCGAAATTCCCAGCCTATGAACTTTAA 1230 0.4455 MADRFFPNEMPNFVAETAVGGTSSQEARDSLTNLLSLPYPTFSTKLQKAALDLKESVVRETWGSSGKRVKDYTLYTGALGTAYLLFKAYQVTKNSNDLSLCSQIIKACDSASIDSSRITFLCGRAGVCALGAVIAKHMGDERLLNTYLGQFKKIRRPHDLPYELLYGRAGYLWACSFLNKHIGKDTISTTDMKPIVDEVIAAGRQLALGGRCPLMYEWHGKKYWGAAHGLAGIMYVLMDFELNPDEVEDVKGTLRYMIKNRFPSGNYRSSEENNSDRLVHWCHGAPGIALTLVKAAEVFGDKEFVQAATDAGEVAWNRGLLKRVGICHGISGNTYVFLSLYRLTGNPEYLYRAKAFACFLLDRAHKLIMEGKMHGGDRPYSLFEGLGGMAYIFLDMIDPKVAKFPAYEL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0638 409 Gene3D - 1 409 IPR012341 GO:0005975
Lele12g0638 409 PRINTS Eukaryotic LanC-like protein family signature 212 224 IPR020464 -
Lele12g0638 409 PRINTS Eukaryotic LanC-like protein family signature 258 273 IPR020464 -
Lele12g0638 409 PRINTS Eukaryotic LanC-like protein family signature 295 316 IPR020464 -
Lele12g0638 409 PRINTS Eukaryotic LanC-like protein family signature 2 15 IPR020464 -
Lele12g0638 409 PRINTS Eukaryotic LanC-like protein family signature 340 358 IPR020464 -
Lele12g0638 409 Pfam Lanthionine synthetase C-like protein 69 409 IPR007822 GO:0031179
Lele12g0638 409 PRINTS LanC-like protein superfamily signature 162 177 IPR007822 GO:0031179
Lele12g0638 409 PRINTS LanC-like protein superfamily signature 324 337 IPR007822 GO:0031179
Lele12g0638 409 PRINTS LanC-like protein superfamily signature 71 89 IPR007822 GO:0031179
Lele12g0638 409 PRINTS LanC-like protein superfamily signature 278 298 IPR007822 GO:0031179
Lele12g0638 409 PRINTS LanC-like protein superfamily signature 223 239 IPR007822 GO:0031179
Lele12g0638 409 PRINTS LanC-like protein superfamily signature 379 396 IPR007822 GO:0031179
Lele12g0638 409 SMART LANC_like_2 68 409 IPR007822 GO:0031179
Lele12g0638 409 CDD euk_LANCL 74 405 - -
Lele12g0638 409 FunFam LanC-like protein 2 1 409 - -
Lele12g0638 409 PANTHER LANC-LIKE PROTEIN 1 409 - -
Lele12g0638 409 SUPERFAMILY LanC-like 68 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0638 Lele-ChrLele12 14740796 14743174 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0638 12 14740796 14743174 Lele12g0638 12 14740796 14743174 ECH
Lele09g0689 09 5231178 5235019 Lele12g0638 12 14740796 14743174 hybridization
Lele10g0628 10 4637572 4639967 Lele12g0638 12 14740796 14743174 hybridization