Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0596 ATGGCTGTCAAAGTTTATATTGTATACTACTCAATGTATGGACATGTGGAGAAACTAGCAGAAGAAATTAAGAAAGGAGCTTCATCTGTAGAAGGAGTCGAGGCTAAACTATGGCAGGTACCCGAGACACTGCCAGAAGAGGTGCTTGGAAAGATGAGTGCACCACCCAAGAGTGATGTCCCAGTCATTACTCCTAATGAATTAGCAGAGGGTGATGGTTTTATTTTCGGTTTTCCAACGAGATTTGGAATGATGGCTGCTCAGTTCAAAGCATTTTTAGATGCAACTGGAGGATTGTGGAGAACACAACAGCTTGCAGGCAAGCCTGCAGGAATCTTCTACAGCACTGCGTCTCAAGGCGGTGGACAAGAGACTACAGCGTTAACAGCTATCACTCAGCTGGTTCATCATGGGATGATATTTGTTCCAATTGGATACACATTTGGTACTGGCATGTTTGAGATGGAGCAAGTGAAAGGCGGAAGTCCATACGGTGCAGGAACTTACGCAGGCGATGGATCGAGACAGCCATCTGAGCTGGAGTTGGAGCAAGCATTCCATCAAGGAAAATACGTTGCCACCATCACAAAGAAGCTCAAGCAAGCTGCTTAA 612 0.4559 MAVKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPVITPNELAEGDGFIFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGIFYSTASQGGGQETTALTAITQLVHHGMIFVPIGYTFGTGMFEMEQVKGGSPYGAGTYAGDGSRQPSELELEQAFHQGKYVATITKKLKQAA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0596 203 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 1 201 - -
Lele12g0596 203 Pfam NADPH-dependent FMN reductase 17 144 IPR005025 GO:0016491
Lele12g0596 203 Gene3D - 1 201 IPR029039 -
Lele12g0596 203 SUPERFAMILY Flavoproteins 4 200 IPR029039 -
Lele12g0596 203 ProSiteProfiles Flavodoxin-like domain profile. 5 192 IPR008254 GO:0010181
Lele12g0596 203 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 4 201 - -
Lele12g0596 203 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 199 IPR010089 GO:0003955|GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0596 Lele-ChrLele12 14388143 14390658 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0596 12 14388143 14390658 Lele12g0596 12 14388143 14390658 ECH
Lele09g0734 09 5563868 5566766 Lele12g0596 12 14388143 14390658 hybridization
Lele10g0672 10 5017744 5018690 Lele12g0596 12 14388143 14390658 hybridization