Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0699 ATGGCCGATCGTTTCTTTCCTAACGAAATGCCAAACTTCGTAGCAGAGACAGCTGTTGGGGGAGCTTCCTCTCAAGCAAGAAACTCACTCACGAATCTCCTCTCTCTTCCTGACCTAACCTTCTCTACGAATCTCCAAAAAGCAGGCTTGGACTTGAAAGAATCAGTTGTGAGGGAGACATGGGGATCAAGTGGGAAACGCGTGAAGGATTATACTGTATACACGGGGGCTCTGGGAACAGCGTACCTGCTATTTAAAGCTTATCAATTTACGAAGAATAGCAATGATCTTAATTTATGCTCACAGATCATTAAGGCATGTGATTCTGCGTCAATAGATTCTAGACAATTGGCTCACAGTGGAAGATGTCCTCTGATGTATGAATGGCATGGCAAGAAATACTGGGGCGCTGCCCATGGACTAACAGGAATTATGTATGTTTTAATGGACTTTGAACTAAAGCCGGATGAGGTGGAAGATGCAAGGGTACACTACGTAGCTGAGATTTTTGGGGACAAGGAATTTATGCAGGCTGCAATAGATGCAGGAGATGTAGTGTGGAAGAGGGGTCTTCTTAAGCGAGTTGGGATCTGCCATGGCATCAGTGGGAACACCTACGTTTTTCTTTCTCTGTACCGGTTAACAGGGAATCCAGAGTACTTGTACAGGGCCAAAGCATTTTCTTGCTTTCTACTTGATAGAGCGTAA 708 0.4477 MADRFFPNEMPNFVAETAVGGASSQARNSLTNLLSLPDLTFSTNLQKAGLDLKESVVRETWGSSGKRVKDYTVYTGALGTAYLLFKAYQFTKNSNDLNLCSQIIKACDSASIDSRQLAHSGRCPLMYEWHGKKYWGAAHGLTGIMYVLMDFELKPDEVEDARVHYVAEIFGDKEFMQAAIDAGDVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNPEYLYRAKAFSCFLLDRA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0699 235 PANTHER LANC-LIKE PROTEIN 1 112 - -
Lele11g0699 235 SUPERFAMILY LanC-like 67 234 - -
Lele11g0699 235 Pfam Lanthionine synthetase C-like protein 167 234 IPR007822 GO:0031179
Lele11g0699 235 Pfam Lanthionine synthetase C-like protein 68 110 IPR007822 GO:0031179
Lele11g0699 235 Pfam Lanthionine synthetase C-like protein 115 153 IPR007822 GO:0031179
Lele11g0699 235 Gene3D - 1 113 IPR012341 GO:0005975
Lele11g0699 235 Gene3D - 114 163 IPR012341 GO:0005975
Lele11g0699 235 Gene3D - 164 235 IPR012341 GO:0005975
Lele11g0699 235 PRINTS LanC-like protein superfamily signature 194 210 IPR007822 GO:0031179
Lele11g0699 235 PRINTS LanC-like protein superfamily signature 70 88 IPR007822 GO:0031179
Lele11g0699 235 PRINTS LanC-like protein superfamily signature 135 150 IPR007822 GO:0031179
Lele11g0699 235 SMART LANC_like_2 67 235 IPR007822 GO:0031179
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0699 Lele-ChrLele11 6639740 6641942 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0699 11 6639740 6641942 Lele11g0699 11 6639740 6641942 ECH
Lele09g0689 09 5231178 5235019 Lele11g0699 11 6639740 6641942 hybridization
Lele10g0628 10 4637572 4639967 Lele11g0699 11 6639740 6641942 hybridization