Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0612 ATGACATTAAATATGTGCTGTAAAGCGTCTGATTCTGCAACTCATTTTGTATTATTATGGAGCATATATTCTGCAATAGGACAAACAGTTGATTGCTACCCCAAAAGATCCTCACAGTCCAATGCGGAGGATTCTGTTATTGAAGTGGGACAACAGAAGTTAGTTGTGGGATCTTTAATTGAAGATGAAAATTGGTTCCTGTTAATTCCCCTGGGGAGCTGTGGGGCTGTGAAAAAGATCCGAAAGCCTAAGCGTTGGAAGCATCCTCAGCCTATAACAAAGACTCAGCTTATACAGTTACGGGACGAGTTTTGGGACACAGCTCCTCATTATGGTGGGCGTAAAGGGGTGGTGGCTTATATGAATGCTGAGCAGGTGAGAAATACACAAATTGTGTTCTCTAGATCTTTGTTGTTGTTCCATTTCCAAAAGAACATCCTTCTTGAAACAGTGTTGCTTGTTAAGAGAAATTCTTTATGGGCGGGCCAATCGTTCTTTGAGTCTTATAACTGTAAGATCTGGGATGCTCTTAGAGCTGCTGCTGAAGCTGATCTAACTCTAGCCCAAGCAATTGTGGATAGTGCTGGGGTCATAGTCCAGACTTCTGATATGGCAGTGTGCTATGATGAAAGAGGAGCAAAATATGAACTGCCCAAGGGTAGCAACTCTTATTCCTTACCATCTCAACTTGATGTTTACCCTATCTCTGAATCACATGACACACTATCTCAATTGTAA 738 0.4173 MTLNMCCKASDSATHFVLLWSIYSAIGQTVDCYPKRSSQSNAEDSVIEVGQQKLVVGSLIEDENWFLLIPLGSCGAVKKIRKPKRWKHPQPITKTQLIQLRDEFWDTAPHYGGRKGVVAYMNAEQVRNTQIVFSRSLLLFHFQKNILLETVLLVKRNSLWAGQSFFESYNCKIWDALRAAAEADLTLAQAIVDSAGVIVQTSDMAVCYDERGAKYELPKGSNSYSLPSQLDVYPISESHDTLSQL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0612 245 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 155 219 IPR039869 -
Lele11g0612 245 Pfam Ubiquitin-binding domain 152 219 IPR032752 -
Lele11g0612 245 Pfam Ubiquitin-binding domain 78 123 IPR032752 -
Lele11g0612 245 Gene3D - 150 220 IPR038169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0612 Lele-ChrLele11 5985131 5990964 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0612 11 5985131 5990964 Lele12g0723 12 15372632 15375386 ECH
Lele11g0612 11 5985131 5990964 Lele11g0612 11 5985131 5990964 ECH
Lele10g0549 10 4031872 4034644 Lele11g0612 11 5985131 5990964 hybridization