Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0575 ATGGGTTTTTCCTCTGCTGAAGGTGAAGGTCGATCATTTCTCACTCTATCCTCAAACATGGCGACTCAAATCTTCTCTCGCACCTTCCCTAAATCCCTAGTCTCAGCTTTCTTCATTTCTCGCTCTCTTTCATCCTCCATCACCGCCACTTCCTCTGCTTCCCTTTCCGTCGCGGCTCGTTCCCCCCACTCCGCGCTTGCGTTCCTCCGCCGCCTTCGCCCTCTCGCCGTCGCTTCTGTTGATATCCATCGCCGCATACTTGCGCCTCCCTCCCTGCGGTTCTTCTCAACCCGTGCGACTTCCTCTTCGCTCAATGATCCCAACCCCAACTGGTCGAACCGGCCTCCTAAAGAGACAATCTTGCTTGATGGATGTGATTTTGAGCATTGGCTTATTGTCATGGAGAAGCCCGAAGGTGATCCCACCAGGGAAGAGATCATTGATAGCTATATCAAAACTTTGGCGCAGGTGGTGGGCAGTGAAGAAGAAGCCAGGATGAAGATATATTCTGTTTCAACTAGACATTACTTTGCATTTGGGGCTCTTGTATCTGAAGAACTTTCGTACAAAATTAAAGAATTGCCTAAAGTTCGGTGGGTCCTTCCTGATTCATATTTGGATGTCAAGAACAAAGATTATGGAGGTGAACCCTTTATAAATGGGGAAGCTGTTCCATATGATCCCAAGTATCATGAAGAATGGGTAAGGAACAATGCTCGCGCAAATGAGAGGAACAGGCGCAATGATAGGCCTCGAAATGCTGATAGGTCAAGAAATTTTGATAGGAGAAGGGAAAATATTGTGAACAGAGATATGCAAGCTGGACCTCCCATGCAGAATGCTGGTCCTAACATGACTGGACCTCCTCCTAGCAACCTTGGGGGAGTCCCTCCAAGCCAACCTGGTGGATATCCTCCTAATAACCCAGCTGGATATCCACGGCAACAAGGTGGATACGCTCCCAACAATCCAAGCGGATATGCTGCCCCCAATCCAGGCGGGTTCCCTGCCAACAACCCAGGGGGATACCCTGCCAACAACCCAGGGGGATACCCTGCCAACAATCCAGGGGGATACCCTGCCAACAACCCGGGCGTGTACCCTCCCAGCAACCCAGGCGGCTACCCTCCCAACAACCCAGGTGGCTACCCTCCCAACAACCTTGGCGGCTACCCTGCAAACAGCCCAGGCGGATACCCTCCCAACCAAATGGGTGGATTCCCTCCTCGTAACATAGGTGGAGGCCCCCCAAACAGTCAGGGCAACATGCCGCCACCCGGCAATATGGGAGGGATGCCATCAAATCAGAACATGGGAGGCCAGGGAGGGGTTCCGCCAAATGGAGGATGGTCCGGTAGAGACTATTAG 1368 0.5212 MGFSSAEGEGRSFLTLSSNMATQIFSRTFPKSLVSAFFISRSLSSSITATSSASLSVAARSPHSALAFLRRLRPLAVASVDIHRRILAPPSLRFFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTREEIIDSYIKTLAQVVGSEEEARMKIYSVSTRHYFAFGALVSEELSYKIKELPKVRWVLPDSYLDVKNKDYGGEPFINGEAVPYDPKYHEEWVRNNARANERNRRNDRPRNADRSRNFDRRRENIVNRDMQAGPPMQNAGPNMTGPPPSNLGGVPPSQPGGYPPNNPAGYPRQQGGYAPNNPSGYAAPNPGGFPANNPGGYPANNPGGYPANNPGGYPANNPGVYPPSNPGGYPPNNPGGYPPNNLGGYPANSPGGYPPNQMGGFPPRNIGGGPPNSQGNMPPPGNMGGMPSNQNMGGQGGVPPNGGWSGRDY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0575 455 MobiDBLite consensus disorder prediction 241 341 - -
Lele10g0575 455 MobiDBLite consensus disorder prediction 241 269 - -
Lele10g0575 455 MobiDBLite consensus disorder prediction 362 383 - -
Lele10g0575 455 MobiDBLite consensus disorder prediction 362 455 - -
Lele10g0575 455 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 36 318 IPR039206 GO:0016554
Lele10g0575 455 MobiDBLite consensus disorder prediction 290 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0575 Lele-ChrLele10 4206739 4209856 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0575 10 4206739 4209856 Lele10g0575 10 4206739 4209856 ECH
Lele10g0575 10 4206739 4209856 Lele11g0635 11 6151228 6153238 hybridization
Lele10g0575 10 4206739 4209856 Lele12g0699 12 15186759 15189710 hybridization