Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0570 ATGCCTTCGTCCCCCAAGTCCTTCTACGCCCGCCCACCTCCGCTGTCATCTCGTAGATCCGCGCTCCTGATAATCTTCTGCCTCCTGATCGGCTTCTCTGGTTTTCTATATGGAATCAAAGCCTTTCTACGGCCGATTCACGGTTATCAATGTCTGAATACCCGGCTTAGATCCGTACGGGTGGTTTGGGAGCAAGTTGGCAGCAGCAGCGGTGATTCGAACGATGGGATCTATGGTGGAATTGGAAAGGATAGGCATAAAGTCATGGGCTTCGTGGGGATTCAGACCGGATTCGGATCCGTAGGTAGGCGCCAGTCGCTTAGGAAGACTTGGTTCCCATCGGATCGCCAGGGGCTTGAACGCTTGGAAAAAGCCACTGGATTAGCATTTAGGTTTATCATTGGTAGAACAAATGCTAAATCAAAGATGGCAGCGCTTCGGAAGGAAATAACAGAATACGATGATTTCATTCAATTGGACATCGAAGAGGAGTACAGTAAGCTACCATACAAAACTTTGGCTTTCTTTAAAGCTGCCTATGCACTTTTTGATGCTGAATTTTATGTCAAAGCTGATGACGATATATATTTAAGGCCAGATCGGCTTTCATTACTGCTGGCAAAAGAGCGATCTCATTCTCAGACTTACATAGGATGCATGAAAAAGGGCCCTGTTTTCACTGACCCGAAGCTTAAATGGTTTGTTCCTCAATTATTTCAGCTGTAA 726 0.4614 MPSSPKSFYARPPPLSSRRSALLIIFCLLIGFSGFLYGIKAFLRPIHGYQCLNTRLRSVRVVWEQVGSSSGDSNDGIYGGIGKDRHKVMGFVGIQTGFGSVGRRQSLRKTWFPSDRQGLERLEKATGLAFRFIIGRTNAKSKMAALRKEITEYDDFIQLDIEEEYSKLPYKTLAFFKAAYALFDAEFYVKADDDIYLRPDRLSLLLAKERSHSQTYIGCMKKGPVFTDPKLKWFVPQLFQL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0570 241 Gene3D - 91 236 - -
Lele10g0570 241 Pfam Galactosyltransferase 103 237 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele10g0570 241 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 85 236 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0570 Lele-ChrLele10 4179091 4180242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0570 1 236 Glycosyltransferase AT1G53290 65.833 7.45e-109 315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0570 10 4179091 4180242 Lele10g0570 10 4179091 4180242 ECH
Lele10g0570 10 4179091 4180242 Lele11g0629 11 6117921 6120742 hybridization
Lele10g0570 10 4179091 4180242 Lele12g0705 12 15218862 15221925 hybridization