Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0566 ATGGCGAATCGAAACTTGGAAAAGATGGCATCCATTGATGCCCAGCTTCGGCAACTGGTTCCTGCTAAAGTGAGTGAAGATGACAAACTGATTGAGTATGATGCTCTTCTTCTGGATCGGTTTCTTGATATTCTCCAGGACTTACATGGCGAGGATCTGAAGGAAACGGTTCAAGAAGTATATGAGCTTTCTGCTGAGTATGAAGGAAAGCATGATCCTGAAAAACTTGAGGAGCTTGGGAAAACAATAACCAGTTTGGATGCTGGGGACTCTATTGTGGTTGCAAAATCCTTCTCCCATATGCTTAACTTGGCCAATTTAGCCGAGGAGGTTCAGATTGCTCACCGACGAAGAAACAAGCTGAAGAAAGGGGATTTCGTAGACGAGAGCAATGCAACTACTGAATCAGACATCGAAGAGACTCTCAAGAAACTCGTGGTGGACCTGAAGAAATCCCCTCAAGAAGTTTTCGATGCTCTGAAAAACCAGACTGTTGATCTGGTTCTTACTGCTCATCCTACCCAATCAGTTCGTAGATCTTTGCTTCAGAAACACGGAAGGATTCGGAATTGTTTAGCTCAGTTGTATGCCAAAGACATCACTCCTGATGATAAGCAGGAGCTTGATGAGGCCCTACAGAGGGAGATTCAAGCTGCCTTCCGAACTGATGAAATCAGGAGGACTCCTCCAACACCACAAGATGAAATGCGGGCAGGAATGAGCTACTTCCATGAAACAATCTGGAAGGGTGTCCCAAAATTTCTTCGCCGTGTTGACACGGCTTTGAAGAATATAGGGGTTAACGAGCGTGTTCCTCATAATGCTCCAGTTATTCAATTTTCTTCTTGGATGGGTGGCGATCGTGATGGAAATCCAAGAGTAACTCCTGAAGTTACAAGGGACGTTTGCTTATTGGCTAGAATGATGGCTGCTAATTTGTATTATTCCCAGATTGAGGATCTTATGTTTGAGCTGTCTATGTGGCGTTGCAACGATGAGCTACGAGTCCGTGCGGATGAACTTCATCAATCTGCTAAAAAAGATGAAGTTGCAAAACATTATATTGAGTTTTGGAAGAAAATCCCCCCAAGTGAACCATACCGTGTGGTGTTGGGTGATGTAAGAGATAGGCTGTATAAGACCCGCGAACGTTCTCGCCATATGCTAGCTCATGGTCATTCTGATATTCCAGAGGATGCAACTTTCACCAACGTTGAGGATTTCTTGGAACCTCTTGAACTCTGTTATCGATCACTTTGTGCTTGTGGTGATCAGGCGATTGCCGATGGAAGCCTTCTCGATTTCTTGAGGCAGGTCTCCACTTTTGGACTATCACTAGTGAGGCTTGACATCAGGCAAGAATCGGAACGTCATTCCGATGTCATGGATGCTATTACCAGACATTTGGAAATTGGCTCCTACAACGAATGGTCTGAAGAGAAGAAACAGGAATGGCTTTTGTCTGAGTTGAGTGGCAAGCGGCCATTGTTTGGACCTGATCTTCCCACAACTGAAGAAATCAGAGATGTTTTGGACACATTTTATGTCATAGCTGAGCTACCACCAGACAGCTTCGGAGCATACATCATTTCAATGGCAACAGCACCGTCCGATGTTCTCGCTGTTGAACTTCTGCAACGAGAATGCCACGTAAAGCATCCATTAAGAGTTGTCCCCTTGTTCGAGAAGCTTGCAGATTTGGAGGCTGCTCCAGCTGCTTTAGCCCGGTTGTTCTCGGTAGACTGGTACAAGAATCGCATCAACGGGAAGCAAGAAGTGATGATTGGTTATTCAGATTCAGGTAAAGATGCTGGTAGATTCTCTGCAGCATGGCAGCTATATAAGGCTCAAGAGGAACTGATAAATGTAGCCAAACAATATGGTGTTAAGCTAACCATGTTTCACGGTCGCGGTGGGACTGTAGGGAGAGGAGGTGGACCCACCCACCTTGCTATCCTGTCTCAACCACCTGAGACGATTCACGGATCCCTTCGTGTAACCGTTCAGGGTGAAGTTATCGAGCAATCATTCGGAGAGCAGCACTTGTGTTTTAGAACACTTCAACGTTTCACCGCTGCTACTTTAGAGCATGGAATGCATCCTCCAATTTCACCAAGGCCAGAATGGCGTGCCTTAATGGACGAGATGGCTGTCATCGCCACTGAAGAATATCGTTCTATCGTATTCAAAGAACCCCGATTTGTCGAGTACTTCCGCCTGGCTACACCAGAGTTGGAGTATGGTAGGATGAACATTGGAAGCCGGCCAGCGAAGCGAAGGCCAAGTGGAGGAATTGAAACACTCCGGGCAATACCATGGATCTTTGCATGGACACAGACGAGGTTTCATCTGCCGGTGTGGCTTGGATTCGGGGCTGCGTTCAAGCACATTATCGAGAAGGATGTGAGGAACCTGCAAATGCTGCGAGAGATGTACACTCAATGGCCTTTCTTTAGGGTCACCCTTGATTTAGTTGAAATGGTGTTTGCCAAGGGAGACCCCGGCATTGCTGCTCTCTACGATAAGCTCCTCGTTTCCCCAGAATTGTGGCCATTTGGAGAGCAATTGAGAGCCAAGTATGAAGAAACTAAGAGACTCCTTCTTCAGGTGGCTGGGCACAAGGATCTTCTTGAAGGAGACCCTTACTTGAAGCAGAGACTCAGGTTACGTGATTCTTACATTACTACCCTAAATGTTTGCCAAGCTTACACATTGAAACGCATTCGGGATCCGAGCTTTGGCGTGAATGTGCGACCCCACCTGTCAAAGGAATCTGTGGAGATAAGTAAGGCGGCGGATGAACTCGTAACGCTAAACCCAACGAGTGAATATGCGCCTGGTTTAGAAGATACCCTCATTCTCACCATGAAGGGTATTGCTGCTGGCCTGCAGAACACTGGTTAA 2904 0.4645 MANRNLEKMASIDAQLRQLVPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYEGKHDPEKLEELGKTITSLDAGDSIVVAKSFSHMLNLANLAEEVQIAHRRRNKLKKGDFVDESNATTESDIEETLKKLVVDLKKSPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGVNERVPHNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRADELHQSAKKDEVAKHYIEFWKKIPPSEPYRVVLGDVRDRLYKTRERSRHMLAHGHSDIPEDATFTNVEDFLEPLELCYRSLCACGDQAIADGSLLDFLRQVSTFGLSLVRLDIRQESERHSDVMDAITRHLEIGSYNEWSEEKKQEWLLSELSGKRPLFGPDLPTTEEIRDVLDTFYVIAELPPDSFGAYIISMATAPSDVLAVELLQRECHVKHPLRVVPLFEKLADLEAAPAALARLFSVDWYKNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELINVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRFTAATLEHGMHPPISPRPEWRALMDEMAVIATEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRRPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKHIIEKDVRNLQMLREMYTQWPFFRVTLDLVEMVFAKGDPGIAALYDKLLVSPELWPFGEQLRAKYEETKRLLLQVAGHKDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPSFGVNVRPHLSKESVEISKAADELVTLNPTSEYAPGLEDTLILTMKGIAAGLQNTG 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0566 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 593 605 IPR033129 -
Lele10g0566 967 Pfam Phosphoenolpyruvate carboxylase 35 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele10g0566 967 PRINTS Phosphoenolpyruvate carboxylase signature 765 791 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele10g0566 967 PRINTS Phosphoenolpyruvate carboxylase signature 442 462 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele10g0566 967 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele10g0566 967 PRINTS Phosphoenolpyruvate carboxylase signature 280 295 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele10g0566 967 PRINTS Phosphoenolpyruvate carboxylase signature 220 236 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele10g0566 967 PRINTS Phosphoenolpyruvate carboxylase signature 591 611 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele10g0566 967 PRINTS Phosphoenolpyruvate carboxylase signature 633 662 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele10g0566 967 Coils Coil 104 124 - -
Lele10g0566 967 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 967 IPR015813 GO:0003824
Lele10g0566 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 168 179 IPR018129 -
Lele10g0566 967 FunFam Phosphoenolpyruvate carboxylase 1 308 445 - -
Lele10g0566 967 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele10g0566 967 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 967 IPR022805 GO:0006099|GO:0008964|GO:0015977
Lele10g0566 967 Gene3D Phosphoenolpyruvate/pyruvate domain 308 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0566 Lele-ChrLele10 4138206 4142691 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0566 10 4138206 4142691 Lele10g0566 10 4138206 4142691 ECH
Lele10g0566 10 4138206 4142691 Lele11g0627 11 6086610 6091252 hybridization
Lele10g0566 10 4138206 4142691 Lele12g0707 12 15258283 15262778 hybridization