Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0552 ATGTTAACCAAGAAACGGTCCACTTCATCAGAAACCGAGTTCAAGAATCTCGACCGTTCATTCCACGCGTCTACCTCTGACCAACGAGTTTTGTATGGCCATTTCAAGTTCACAGTTATGGGACATATCTCAGGGAATCCTAAGGCATATATAAGTCAGGACAATAGTATTTTTGTGAATAAAAAAATTACTGTACTTGGCATATCATCAAAATTTCAGAAGACAGAACTTGTGATGGAATCAGTTAAGCCATCAGCAGTTGTACCAAGAAAGAGTAAACTGGCTCGCACGTTTGCCAAGGTTCTTCACCTTAAAACATTCACTGGAATTGCACAAATTGAAGGACAGAAGAAAGTTAAAGCTGAAGCAAATCTCCAGGATGAAGGCAACAGCTTATGTCATAACATAGAAGATGAAGAGCTTCACGAAAGAATAGCCTCAGAAGCTTCGCTTGCAAAAGTATTTGCTAGCATTTCTTTTGTTAAAGCTTCATATGCCCAGCTTCAATTTGCTCAATCTCCTTATGATCCAGATGGGATTGAAGCTGCTGATAAATTAGTAGTCTCTGAGTTGAAGAACTTGTCTGAGCTAAAGCAGTGTTTCTTGAAGAAACAGTCAGACCCTTCACCCGAGACAGCGATTGTCGCAGCTGAATTGAAGGAGCTGCAAAGTGTTAACAAAACCTTTGAGATTATGGGGAAGAAGTTAGAATCTCAGGTAAGGCTAAAGGAATCTGAGATTATATTTCTGAGGGAAAAGTTAGAGGAAGCTACTAAGCATAACAGATTGATGGAGAAGAGATTGAATCTAAGTGGCTCATTATCTATGCTTGATAATCTGCATATATCTGGATTAAGTTCAAGCCATTTTATCTCTGTTCTTCGCCACACAATTAGGTCGATTCGAAGTTTTGTAAGGTTGGTTGTGGATGAAATGAGATCAGTTGGGTGGGATATTGATGGTTCTGTGAATGCTATTCATAGGAACATTGTCTTCTGGAAAGAAGATCACAAGTGTTTCGCCGTTGAGTCCTTCGTTTGCAGGGAAATGTTTGATTCTTTCCACTTCCCTAACTTCTCTATTCCTAGTGAAAACCCTCCAGATAGGAATAATAATCAACAGAAGCTGCTGTTCTTTGAGAGATTCAATGAGCTGAAGTTCATGAAGGCAAAGGAGTTTCTTTCTGAGAAGCCAAGATCATCGTTTGCCAAATTCTGCAGGGGCAAGTACTTGAAACTTGTTCATGCAAAGATGGAGTTATCATTTTTTGGTAACCTGCACCAGAGAGAACTTCTAAATGCTGGAGAAGTTCCAGATACTAGCTTCTTCACATCATTTGCTGAGATGGCCAAGGGGGTATGGCTTCTGCATTGCTTGGCCTTCTCCTTTGAGCCTCAAGCTTCAATCTTTCAAGTGAAAAAGGGATGTAGGTTCTCTGAAGTGTACATGGAATGTGTGAATGATGATGATTTTTCCGACCATACACAAGTTGCTTTCACTGTAATTCCAGGGTTCAGGATTGGTAAAACTATTATACAGTGCCAAGTTTACCTCTCACAGTCCCAAAGCAGGGTAGAAAAGTACACTTCCACCACCAAACAAAGGTAG 1608 0.4024 MLTKKRSTSSETEFKNLDRSFHASTSDQRVLYGHFKFTVMGHISGNPKAYISQDNSIFVNKKITVLGISSKFQKTELVMESVKPSAVVPRKSKLARTFAKVLHLKTFTGIAQIEGQKKVKAEANLQDEGNSLCHNIEDEELHERIASEASLAKVFASISFVKASYAQLQFAQSPYDPDGIEAADKLVVSELKNLSELKQCFLKKQSDPSPETAIVAAELKELQSVNKTFEIMGKKLESQVRLKESEIIFLREKLEEATKHNRLMEKRLNLSGSLSMLDNLHISGLSSSHFISVLRHTIRSIRSFVRLVVDEMRSVGWDIDGSVNAIHRNIVFWKEDHKCFAVESFVCREMFDSFHFPNFSIPSENPPDRNNNQQKLLFFERFNELKFMKAKEFLSEKPRSSFAKFCRGKYLKLVHAKMELSFFGNLHQRELLNAGEVPDTSFFTSFAEMAKGVWLLHCLAFSFEPQASIFQVKKGCRFSEVYMECVNDDDFSDHTQVAFTVIPGFRIGKTIIQCQVYLSQSQSRVEKYTSTTKQR 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0552 535 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 91 519 IPR040225 GO:0009639|GO:0009959
Lele10g0552 535 Coils Coil 247 267 - -
Lele10g0552 535 Pfam Plant protein of unknown function (DUF641) 146 267 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0552 Lele-ChrLele10 4053531 4057751 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0605 09 4614242 4617923 Lele10g0552 10 4053531 4057751 ECH
Lele10g0552 10 4053531 4057751 Lele10g0552 10 4053531 4057751 ECH
Lele10g0552 10 4053531 4057751 Lele11g0615 11 6008787 6010157 hybridization
Lele10g0552 10 4053531 4057751 Lele12g0720 12 15349178 15353366 hybridization