Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0548 ATGGCGATAGACGCCGTCCTTAGCTCCTCTGCGACCACTGCAACCATCTTCCGGAACTACATGTGGATTCCGATTCTGATCACCCTTTTGAAATGCGTTGGATTGGCAGAGGCTCAGTTCGGGATTGTTCTGCCCAGTCAACGATCGTCTTCCACTTGCCCCGACCCAGACTCCGATCTCTACTACCGGCCGGTCATCGGGATTGTTAGCCACCCGGGTGACGGAGCCTCCGGACGCCTCACAAACGCCACTAATGCTTCTAGTATTGCTGCCTCCTACGTCAAATTTGTTGAAGCTGCTGGCGCGAGAGTTATTCCCCTCATCTACACCGAGCCTCCCGAAAAGCTTCTTAAGAAGCTCGATTTGGTGAATGGAGTGCTATTTACTGGTGGTTGGGCTGATGGTGGGTTATATTTCGAGACTATTCGAACAATATTCAAGAAAGTTTTGGAGAAAAATGATGGCGGGCACCATTTCCCATTATATGCTACCTGCTTAGGTTTTGAACATATAACCAGGATCGTTAGTGAGGATAATAATATTCTTGAAGAATTTAGTGCAAGAGATCAGGCAAGTACTCTACAATTTACAGAAAATGCAACTATTGATGGAACAGTATTTGAAAGATTTCCTCCAGGCTTGTTAAAGAAGCTTACCACTGATTGTCTTGTCATGCAAAATCATCATTTGGGCATATCCCCGAGAAAGTTTCTGGATAATAAAAAATTGTCTAGTTTTTTTGAGCTATTGACAACTTCCAAGGATGAAAATAACAAGGACTATGTATCCACAGTACGTTCATGGAACTATCCTGTGACTGGCTTCCAATGGCATCCAGAGAAAAATACTTTTGAATGGGCCTCACCAAGAATCCCACACACAGAGGAGGCCATCCAAGTGACTCAATACGTTGCAAACTTTTTGGTGAGTGAAGCTAGGAAATCTATTAACAGGCCCCCTGAACAAGAAGTGCTGGACAATCTCATTTACAATTACATTCCTACTTATAGTGGGAAGGCAGGGAGAGGATTTGATCAAGTTTTTATCTTCACATAA 1056 0.4394 MAIDAVLSSSATTATIFRNYMWIPILITLLKCVGLAEAQFGIVLPSQRSSSTCPDPDSDLYYRPVIGIVSHPGDGASGRLTNATNASSIAASYVKFVEAAGARVIPLIYTEPPEKLLKKLDLVNGVLFTGGWADGGLYFETIRTIFKKVLEKNDGGHHFPLYATCLGFEHITRIVSEDNNILEEFSARDQASTLQFTENATIDGTVFERFPPGLLKKLTTDCLVMQNHHLGISPRKFLDNKKLSSFFELLTTSKDENNKDYVSTVRSWNYPVTGFQWHPEKNTFEWASPRIPHTEEAIQVTQYVANFLVSEARKSINRPPEQEVLDNLIYNYIPTYSGKAGRGFDQVFIFT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0548 351 Gene3D - 61 351 IPR029062 -
Lele10g0548 351 FunFam Folate gamma-glutamyl hydrolase 60 351 - -
Lele10g0548 351 SUPERFAMILY Class I glutamine amidotransferase-like 87 346 IPR029062 -
Lele10g0548 351 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 79 317 - -
Lele10g0548 351 Pfam Peptidase C26 64 280 IPR011697 GO:0016787
Lele10g0548 351 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 22 351 IPR015527 GO:0008242
Lele10g0548 351 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 55 351 IPR015527 GO:0008242
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0548 Lele-ChrLele10 4027314 4030104 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0548 10 4027314 4030104 Lele10g0548 10 4027314 4030104 ECH
Lele10g0548 10 4027314 4030104 Lele12g0724 12 15376872 15379910 hybridization