Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2451 ATGGCCAACGCCCAGTCTCTACCGGAAGTTGCAGAAATGAAAATCCCAGTGTTCACGGTGCTCAAGAATGGGGCTATTCTCAAGAACGTCTTCATCGTCAACAAATCCCCTCAACCAGAACCCCTAGCTTCTTCCGTTCAAGATCACGACCACCAGGAGGATCACATCTTGATCGTTGGGCGACATCCTGATTGCAACATCATGCTCACTCATCCCAGCATCAGTAGATTTCACCTCCAGATTCAGTCCAACCCTCGCTCGCAGAAGCTCATTGTCGTCGATTTATCTTCCGTGCACGGGACGTGGGTATCGAGGAGGAAGATTGAACCTGGTATGAGTGTGGAAATGAAGGAGGGCGACACGTTGAGAGTTGGTGCTTCCAGTAGACTTTATCGGCTGCATTGGATTCCCATAAGCCGTGCCTATGATTTGGAAAATCCCTTTGTGTCGGAATTGGACATGGCTTTGGAAGCAGAAAAAGGACAGGAGGACGATGCATTGCCTCAAGAAGAAGAAAAAGAGATGACGCAGAATGAAAGCTTTTGTCCAGTAGATAATGAAGAAGTTCAATCAGTGGATTCAATACTGGAGTCTATCAATTGTTTGTTCACTGATGAGAATTTAGAGTTCATTGTGAAGAATGAAATTCCTTCAGAAGACTGCATTTCTTTGTACTGTGATGAAGAAGAGAATTGCCCAAGTGATGACCACCCAGAAGATAAAACTACTAGTGGCCTCTTTGGAACTGAAACGTCATATTTGCCTGAAAACTCTCTGAATGAAAACAAAGCGTGTAACACAGATTTGCAATTTCTATCACCACCTCGTGCAGAATCAGTATTTGAACGTGGTAATCTGAATACTACTTCTCAGGGACCACAGAAAATGCCTAATTTTTCTGTAAACGTGGAACATTTATTCCATGTTGGAGAGGAACATCAGGCCTATTCTGGAGCAGAGGTTCCCAAAGAGACCAACATTTTAAGCACATTGGGCGATTATTTGAGAGAGAACATATGTTTTCCAGTTGTTGAAGCTGTCCATGGGACCAAAATCCAGCAATTTCAAGATGTTCTGCAAAATGCGCCATTTGGTACATATACTTCACAGCTACCGCCTGTTGAGCAGAAGGTTCCCTTCGAAAAGCATAGGTTAGACGAGCTAACAAACCTAGAACCTGCATCTTTGGATAAAACAGGTGCAGCTGTAGCGGCTGAAATGCCTAAAGAAACTGGGTTTGGATGCACACTGAGAGATGATGATAGAGGGGCACACGTTATAACAACTGGAGCAGAAAATCTCATAACTGAGAATACTTTCTCGCTGCCGGTTGATGAAGCTACTCATGAAACCAAATTTCAACCAATTGAAGTTGATTTGGATTCAGTATCTGGTAGTGAAAAGCAAATTAATTGTTGCCAAGATCATAAGTCAAACTTCCAGCCATACCAGAATTCTACCTCTTGCAATGAACAAGGGAACTCAATGGATGGAATAGTTCAAGATGTTGGAGACAAGTGCAGCAATAACATCTCTCTCATTTCTCTTCCAGTAGAATCCTCAATTTTATCTTTGTCTGAGGAATCTATCATGGAGATTTCAAACAAGAAAGAGAGCCAGACCCAACAATCTCTTGATGCTATGGCAGGATGCTCTGAGAAGAAAATTCTTGAAAAAAGTGGAGAATCAATAATAGAAAAACATTTCATGTGTAATAATATTTGGTCAAGAAGAGGTAAAGCTACAAGTGCCCCTCGTATTCGAACCAGCAAGAGTCGAATTAAGAACACGACTAATGTTGACATTGAAGCTGAAACGAGCTATCAGAAGGATATCAAAGAGAGATCGAAAGCCAAGGATCTTTTGTCTGTTTTAGATGGGGAAGAAGAAGAAATCTTCACTCCAGATAAGGAAAACTTCCGCCCAAATACTCTTCAATTACGGTTTCAGAAGAAGAAGGGTAAGCTGGAAGAAATTAAACATTACAAGTCACGACAAAGGTCACACAGTTCTGAGAATCACATGAGCCCTGAGATCCATCTGGGAGAGATCCCCATTTCAGAAAAAGAGAACCAGACTCTAGAAGTTGTCCAAGAACAGAAGTCAGAAAGAAAGCCATTTGGCAGTTATATCAAGTTGGAGCGAAATGCCATAGATATGAGCAATCAGAAGGATATGACGGATAAAACAGTTCCAAAGAATCTTTTAGCTGAATTGGATGATGAGGAAGAAGAATATCATACTCTAGATAAGGAAAATTTTAGCCCAAATACCCTTCAATTGCTATTACTGGAAAAAAAGGGTAAACCGGAAGATCTTAAACATTCCAAGTCACGAAAATCGCACAGATCAAATGCTAATTTCAGCTCCAGCACCACTTCAGGAAAAGAGAACCAGGCTTCAAAAGTTGCCAGAGAACAGAAGTCAAAAAGAAGAGCCTTTGGCAATTGTATTGAGTTGGAGCAAGAGCAAGATGACATGGCAGGGGAAAACAGATTAGAAAGGTTACCCTTTCAATCGCTACTTACGAAATCTGGAGGCAAGAGCAAATCAGAGACATCTCGTTCTGTTTTTGCTGCAGAAAACATCATGGCCAATACTTGTGCGCAAATTTTGGATAAGAGCAATGGCCTTTCTCATGCTAGTGAGAGAAGCTGGAACATGGTTGTTGACACCGCATCTCTTCTGAACAAGGAGTCAAGGAAAGCTCTGATGCTCTTGCAGGGTCTCAAGGGCACCCATTTAATCATTCCAAGGATAGTTATAAAAGAACTGGACAGCATGAAGCGACAGTATAGCTTCTTTAGAAGAACATCAGAGGCATCTTTGGCATTGGAATGGATTGAGGAATGTATGATGAATACAAAGTGGTGGATTCATGTCCAAAGCTCAATAGAGGAGGGCATGTTGATTGCTCCCACACCACCTGCTACTCCACCGACTCAATTTAATGAAGAAAGTTGGAATTTTTACCTTCACAAGAGCTCAATGGAAATTGTTTCACCAACAGCTGAGGATCATGTCCTTGACTACGTTCTTACGTATAGAAGAAAGCAGAACGATGGACAGTTTGTCCTTCTCAGTGACGATGTCACCTTAAAAATCAAATCCATGGCAGAGGGGTTGCTATGTGAGACAGTTGAGGAATTTCGTGATAGTATAGTGAATCCATTCTCTGAGCGGTTCCTGTGGGCCAATAGCTCACCTCGAGGACAGACTTGGTCTTGCCAGGATGATGTCGTTTTAAAGGAGAAATATTCTCATTCCCCTTCGAGGAAATCATCAAAGGGAGAAGGTGCTAAGGGTCTGAAGCTTATTCTGCTTCATAATTCTCGCTATGGCCGATTCACTTCTGCCCGCTAA 3363 0.4208 MANAQSLPEVAEMKIPVFTVLKNGAILKNVFIVNKSPQPEPLASSVQDHDHQEDHILIVGRHPDCNIMLTHPSISRFHLQIQSNPRSQKLIVVDLSSVHGTWVSRRKIEPGMSVEMKEGDTLRVGASSRLYRLHWIPISRAYDLENPFVSELDMALEAEKGQEDDALPQEEEKEMTQNESFCPVDNEEVQSVDSILESINCLFTDENLEFIVKNEIPSEDCISLYCDEEENCPSDDHPEDKTTSGLFGTETSYLPENSLNENKACNTDLQFLSPPRAESVFERGNLNTTSQGPQKMPNFSVNVEHLFHVGEEHQAYSGAEVPKETNILSTLGDYLRENICFPVVEAVHGTKIQQFQDVLQNAPFGTYTSQLPPVEQKVPFEKHRLDELTNLEPASLDKTGAAVAAEMPKETGFGCTLRDDDRGAHVITTGAENLITENTFSLPVDEATHETKFQPIEVDLDSVSGSEKQINCCQDHKSNFQPYQNSTSCNEQGNSMDGIVQDVGDKCSNNISLISLPVESSILSLSEESIMEISNKKESQTQQSLDAMAGCSEKKILEKSGESIIEKHFMCNNIWSRRGKATSAPRIRTSKSRIKNTTNVDIEAETSYQKDIKERSKAKDLLSVLDGEEEEIFTPDKENFRPNTLQLRFQKKKGKLEEIKHYKSRQRSHSSENHMSPEIHLGEIPISEKENQTLEVVQEQKSERKPFGSYIKLERNAIDMSNQKDMTDKTVPKNLLAELDDEEEEYHTLDKENFSPNTLQLLLLEKKGKPEDLKHSKSRKSHRSNANFSSSTTSGKENQASKVAREQKSKRRAFGNCIELEQEQDDMAGENRLERLPFQSLLTKSGGKSKSETSRSVFAAENIMANTCAQILDKSNGLSHASERSWNMVVDTASLLNKESRKALMLLQGLKGTHLIIPRIVIKELDSMKRQYSFFRRTSEASLALEWIEECMMNTKWWIHVQSSIEEGMLIAPTPPATPPTQFNEESWNFYLHKSSMEIVSPTAEDHVLDYVLTYRRKQNDGQFVLLSDDVTLKIKSMAEGLLCETVEEFRDSIVNPFSERFLWANSSPRGQTWSCQDDVVLKEKYSHSPSRKSSKGEGAKGLKLILLHNSRYGRFTSAR 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2451 1120 MobiDBLite consensus disorder prediction 769 808 - -
Lele08g2451 1120 Gene3D - 882 1054 - -
Lele08g2451 1120 PANTHER TRANSMEMBRANE PROTEIN 18 736 1110 - -
Lele08g2451 1120 Gene3D - 4 138 - -
Lele08g2451 1120 MobiDBLite consensus disorder prediction 783 800 - -
Lele08g2451 1120 Pfam FHA domain 58 125 IPR000253 GO:0005515
Lele08g2451 1120 SUPERFAMILY SMAD/FHA domain 49 137 IPR008984 GO:0005515
Lele08g2451 1120 CDD FHA 52 133 IPR000253 GO:0005515
Lele08g2451 1120 ProSiteProfiles Forkhead-associated (FHA) domain profile. 57 108 IPR000253 GO:0005515
Lele08g2451 1120 SMART FHA_2 56 108 IPR000253 GO:0005515
Lele08g2451 1120 CDD PIN_Smg5-6-like 889 1053 - -
Lele08g2451 1120 Pfam PIN domain 888 1047 IPR002716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2451 Lele-ChrLele08 30234816 30239272 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g2451 08 30234816 30239272 Lele08g2451 08 30234816 30239272 ECH
Lele05g2536 05 41124113 41125886 Lele08g2451 08 30234816 30239272 hybridization
Lele06g2515 06 32937715 32941924 Lele08g2451 08 30234816 30239272 hybridization