Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1681 ATGTATGAACTTCCTCCCGCAGAAATTCCTTTTATTCGTGTTGTTTTGAGTTATATCTTTTTCACTTCCTTTTTCGAAACGCTAATCAACAAGAATGGAGAAATCAGGAAGCCAAAAAGAAGCCAAGAAGGCATGATGGAACTGCGGAGAAGCCATAAAGTTTTAGAAGAAGGCAAGAAACAACTAAGCCTAGCACTTCCTCTCTTCTCAGTGGGTCTCTTACAGTATAGTTTGCAAACCATCTCTCTCGTGTTCGTTGGTCATCTTGGTACCCGCTCTCTCTCTGCTGCTTCCATGGCCACCTCCTTCGCTTCTGTCACTGGCTTCAACTTGCTAATGGGATTAGCAAGTGCACTGGACACCTTTTGTGGCCAATCATATGGAGCAGGACAGTTCCATATGCTAGGCATACACATGCAAAGATCCATGTTCGTTCTTTCACTGAGCAGTGTATTCCTTGCACTAATATGGGCAAACACAGAACCAATTCTTGTGGCTATGAAGCAAGATAAACTCATATCAAAAGAAGCAGGATCATACAACTATTGCATGATTCCAAGCCTCTTCGCATTTGGCATCCTTCAATCCATTATGAAATTCTTGCAAACCCAAAACATTGTCTTTCCAATGATCATAACTTCTGCGGTTGCAGTTCTGTTTCACGTCGTGTTTTGTTGGCTTTTGACGTTCAAATCTGGACTCGGAATTCGAGGAGCCCCCATTGCAATTTCTCTGTCTTATTGGGTGAATGTGGTGTTAATGGCAGTGTTTGTGAGGTTCTCTTCTTCATGCAAAGCATCATGGACAGGTTTCTCAAAGAAGGCTCTCCACGGGGTCCTTGACTTCCTTAAACTTGCAGTTCCTTCTGCTATTATGCTCTGCTTGAAAGTGTGGACATTTGAGCTGATGGTACTATTGTCAGGCCTTCTTCCTAATCCAACTCTACAAACCTCTGTGCTTTCGATATGCCTCAACATGTTCAATGTAGCTTGGATGATCCCATTTGGTTTGACTGCTGCAGTAAGCATACGAGTGTCAAATGAACTAGGTGCAGGGAATGCAGAAGCTGCAAGTTTAGCAGTTCGGGTGGTGTTAGGCATAGCCTTAAGTGAGGGTACTTTATTACTTCTACTGATGATTCTGCTTCGAAATCTCGTGGGAAGAGTCTATAGCCATGACAAAGAAGTAGTGAGACATGTGGCCTCCATGATACCAGTTTTGGCCATTTCTTGCTTCCTTGATGGGATTCAAAGTGCTTTTTCAGGCATGGTGAGAGGGTGTGGATGGCAGAAGATTGGAGCGTATGTGAACCTGGCATCGTTTTATCTTGCTGGTGTTCCTTGTTCTGTCATATTAGCTTTTGTTGTGCACATGAATGCCAAGGGGCTGTGGTTGGGGATCGTGGTTGCTTTTACACTTCAAGTGGCATTTTTCTTAGTCATCACAATTCGAACTGATTGGGAGGAAGAAGTAAGGCAAAAGAGTTGCAGTATTTATATTCTATATAACATTGTGCAAAGGAAGCTCAGAGTAGAGTGGAGCGTTCAACTATCTCCCTCTCAAGCCCTGCACCAAGTGATCAAATATTATCATCTCAATCACAAGCAGGATAATTCTACTGTACTGGAGTTCAAACCCACTTCATAG 1647 0.4311 MYELPPAEIPFIRVVLSYIFFTSFFETLINKNGEIRKPKRSQEGMMELRRSHKVLEEGKKQLSLALPLFSVGLLQYSLQTISLVFVGHLGTRSLSAASMATSFASVTGFNLLMGLASALDTFCGQSYGAGQFHMLGIHMQRSMFVLSLSSVFLALIWANTEPILVAMKQDKLISKEAGSYNYCMIPSLFAFGILQSIMKFLQTQNIVFPMIITSAVAVLFHVVFCWLLTFKSGLGIRGAPIAISLSYWVNVVLMAVFVRFSSSCKASWTGFSKKALHGVLDFLKLAVPSAIMLCLKVWTFELMVLLSGLLPNPTLQTSVLSICLNMFNVAWMIPFGLTAAVSIRVSNELGAGNAEAASLAVRVVLGIALSEGTLLLLLMILLRNLVGRVYSHDKEVVRHVASMIPVLAISCFLDGIQSAFSGMVRGCGWQKIGAYVNLASFYLAGVPCSVILAFVVHMNAKGLWLGIVVAFTLQVAFFLVITIRTDWEEEVRQKSCSIYILYNIVQRKLRVEWSVQLSPSQALHQVIKYYHLNHKQDNSTVLEFKPTS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1681 548 PANTHER MULTIDRUG RESISTANCE PROTEIN 52 487 - -
Lele08g1681 548 TIGRFAM matE: MATE efflux family protein 67 464 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele08g1681 548 Pfam MatE 288 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele08g1681 548 Pfam MatE 67 227 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele08g1681 548 CDD MATE_eukaryotic 57 493 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1681 Lele-ChrLele08 11329449 11332704 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1681 08 11329449 11332704 Lele08g1681 08 11329449 11332704 ECH
Lele05g1810 05 12166064 12169305 Lele08g1681 08 11329449 11332704 hybridization