Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1672 ATGTCGCTCCACGGCGGACCTACCGACCGCCGGGAAGCGGCCTCGCCGGCAGCCGGGAATGCCGTCTCTGGTGGTGGAAATGGAGTCCTCACAAGCGACTCCAGCAGACCAGCAACGATAGTTTCGAGCCAGCGGTTGCGGTTGAATCCGAACAAGGACCACAAGCCAGATATTTACGATGGCCTGCAGTTGGAATTCAGTCCTTCGATTTTTAGCTCGCTGGAGAGGTATATGCCTCCTAGCATGCTCACTGTGCCTCGGGAAGATAAAGTGAACTTCATGCGGGAGATTTTGCTCAAATATCTGCCCCCCGGAGAGCAGAACAGGGCTCAAAAGCACAGAGATTACAGGCAAAAGATAATATCAAATTATCAGCCTTTACACCGAGAGTTGTACACTTTGAACCCTACAATGTTCTTTGTCCCAGCATTTCTGAAAGCAATCAATGATAGTACAGAGCAAAGCTTTAGAAGTATATTGTCTGAGCCTATTCCGGGCATTTTCACATTTGAAATGCTCCAGCCTCGCTTCTGTGAGTTATTGATATCTGAGATTGAAAATTTTGAGAAGTGGGTGAATGAAACAAAATTTCAAATCATGCGTCCTAACACAATGAATAAATATGGTGCTGTACTTGATGATTTTGGCCTTGAAACAATGCTTGACAAGCTTCTGGAAGGCTTTATTCGTCCCATATCTAAAGTCTTCTTTGGAGAAGTTGGTGGATCAACCCTAGATTCTCATCATGGGTTTGTTGTTGAATATGGTAAAGATAGAGATGTTGACTCAGGTTTTCATGTGGATGACTCAGAAGTAACCTTGAATGTTTGCTTGGGTAAGGAGTTTTCTGGAGGGGAATTATTTTTTCGGGGAACGCGATGTGATAGGCATGTAAATACAGGGAGTCAGTCAGAGTCATTTAAGCAGGAGATATTTGACTACTCTCATGTTCCTGGACGAGCTGTGCTTCATCGTGGTCGGCATCGCCATGGTGCTAGAGCTACTACATCTGGTCATCGGATCAACCTACTTCTATGGTGCAGAAGCTCTGTCTTCAGAGAGATGAAAAGGTATCAAAAAGATTTCTCCGGCTGGTGTGGTGAATGCAATCGTGAGAAGAAAGCAAGGCAGCATTCATCAATTGCTGCTACCAAATTGGAACTGTTTAAGAGAGAAGCAGAGACCACCACATAA 1194 0.4506 MSLHGGPTDRREAASPAAGNAVSGGGNGVLTSDSSRPATIVSSQRLRLNPNKDHKPDIYDGLQLEFSPSIFSSLERYMPPSMLTVPREDKVNFMREILLKYLPPGEQNRAQKHRDYRQKIISNYQPLHRELYTLNPTMFFVPAFLKAINDSTEQSFRSILSEPIPGIFTFEMLQPRFCELLISEIENFEKWVNETKFQIMRPNTMNKYGAVLDDFGLETMLDKLLEGFIRPISKVFFGEVGGSTLDSHHGFVVEYGKDRDVDSGFHVDDSEVTLNVCLGKEFSGGELFFRGTRCDRHVNTGSQSESFKQEIFDYSHVPGRAVLHRGRHRHGARATTSGHRINLLLWCRSSVFREMKRYQKDFSGWCGECNREKKARQHSSIAATKLELFKREAETTT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1672 397 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 246 349 IPR005123 -
Lele08g1672 397 Gene3D q2cbj1_9rhob like domain 167 349 - -
Lele08g1672 397 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 36 386 - -
Lele08g1672 397 MobiDBLite consensus disorder prediction 1 36 - -
Lele08g1672 397 SMART p4hc 165 348 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1672 Lele-ChrLele08 11277102 11282653 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1672 08 11277102 11282653 Lele08g1672 08 11277102 11282653 ECH
Lele06g1674 06 11297813 11304739 Lele08g1672 08 11277102 11282653 hybridization