Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1407 ATGGTTGCAGAAAAACCAGTGGTGATATTCAGCAAGAGCAACTGTTGCCTGAGCTTCTCCGTGAAGTCACTGATAAGCAGTTTTGGGGCAAATCCCACTGTGTATGAGATTGACCAAATCAGCAATGGCGAGCTGATTGAGAAGGAATTGCTCCAATTGGGAACCAAGCCAGAGGTGATATTCAGCAAGAGTAGTTGCTGCATGAGCCATACGGTGAAGGCTCTGATATGTAGCTTTGGGGCAAACCCTACAGTGATAGAGGTGGACAATTTGCCTAATGGGCAACATATAGAGAGAGCTCTCACGCAGTTAGGTTGCAGACCAAGTGTTCCTGCTGTGTTCATAGGTCAGCAATTCATCGGAGGTGCTAATGAACTCTTCAGCCTCAATATTCAGAACAAGCTTGCCCAGTTGCTTTTGGGTGCTAGAGACATCTTCATCTGGGCACGCTAA 453 0.468 MVAEKPVVIFSKSNCCLSFSVKSLISSFGANPTVYEIDQISNGELIEKELLQLGTKPEVIFSKSSCCMSHTVKALICSFGANPTVIEVDNLPNGQHIERALTQLGCRPSVPAVFIGQQFIGGANELFSLNIQNKLAQLLLGARDIFIWAR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1407 150 CDD GRX_GRXh_1_2_like 59 138 - -
Lele08g1407 150 SUPERFAMILY Thioredoxin-like 54 141 IPR036249 -
Lele08g1407 150 Pfam Glutaredoxin 59 120 IPR002109 -
Lele08g1407 150 ProSiteProfiles Glutaredoxin domain profile. 46 146 - -
Lele08g1407 150 Gene3D Glutaredoxin 56 147 - -
Lele08g1407 150 PRINTS Glutaredoxin signature 103 116 IPR014025 -
Lele08g1407 150 PRINTS Glutaredoxin signature 117 130 IPR014025 -
Lele08g1407 150 PRINTS Glutaredoxin signature 58 76 IPR014025 -
Lele08g1407 150 TIGRFAM GlrX-like_plant: glutaredoxin-like family 56 140 IPR011905 -
Lele08g1407 150 ProSiteProfiles Glutaredoxin domain profile. 1 50 - -
Lele08g1407 150 PANTHER GLUTAREDOXIN 1 56 IPR011905 -
Lele08g1407 150 SUPERFAMILY Thioredoxin-like 2 54 IPR036249 -
Lele08g1407 150 Gene3D Glutaredoxin 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1407 Lele-ChrLele08 9017008 9020937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1407 56 147 Miscellaneous Gene Families AT4G15690 52.174 1.45e-30 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1407 08 9017008 9020937 Lele08g1407 08 9017008 9020937 ECH
Lele05g1563 05 10017207 10017524 Lele08g1407 08 9017008 9020937 hybridization
Lele06g1408 06 9075416 9075757 Lele08g1407 08 9017008 9020937 hybridization