Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1371 ATGGGACGGCGGGTTTTAAGCGTCTTGGCGTTCCAAGCAGGAATCGATCTTGCTTGCATGGCCTTATCATTGTCATTATGTTACCCTCTACTTGCCAAACAACTCTGCAACTTCAAGTCGCAGACCACAACCACTCTGTCCCATGCTCTCTCCCCTCGCCGTGATCCAATTCAGTCACATACCCACTCTCCCACTATGATCAAACTCTTCAACAAGACCCTCCGTCGCTTCTGCTCTAATCTCCGGTGGCCACTTCGCCGCCGTTCCTCCTCCAAAATCATCATCAAAAGGTTCGGCAAATCCCACCCAAAACCTTTACACGACGCTAATCGTGAATCCAGCTCCAATGGGTTCGCCATAGTTCATCCCAATAGCCAATTGGGTAGTCCAGAGTCACAGAAGCCAGTACGGATTGCGACATTTAACGCTGCCCTGTTCTCCATGGCCCCTGCTCTTCCTAAGCCAGAAAAAGGAGCCACCTTTGACGATGAAAATGGTGGCGCCGTCAAACCCAGAAGACCCTCCGACGTGAAATTACGAGCAAAGTCAGCGAATGATCGCCCGAAAAGCATACTAAAGCAATCCCCTCTGCACCCAAATTCCATGAATAGTCCCGACAATCTCAGCAATCAACCCAAGTTCACGAAATCCAAGCTGAGAGTTTCCATCGATTTACCAGACAACGAGATTTCTCTGCTGCGAAGTCGGCAATCGAGTTTCTCCGAGTACGAGAAAGAGGGCTCTAATTCGAATGTTGTTTCGAAAGGGAAGGTTGCCGGGAAAGCGTCTGTGAGTTTTTCGGGATATACATCAAACAGGACCAGTAGTAGAACAGTGTTGGATGTTCTGAGAGAATTGGACGCTGATATTTTGGCGCTTCAAGATGTGAAAGCAGAGGAAGAAAATGAAATGAAGCCTTTGTCTGATTTGGCTTCTTCGCTGGGAATGAATTACGTGTTCGCTGAAAGCTGGGCTCCTGAATACGGCAACGCCATCTTGTCCAAGTGGCCGATTAAACGCTCCAGAGTTCAGAAAATCTTCGATGACACAGATTTCAGGAATGTTTTGAAGGCCACCATTGAAGTACCACAAGCAGGAGAAGTCAACTTCTACTGTACCCACCTTGATCATCTTGATGAGAATTGGCGCATGAAGCAGATCAACGCGATAATCCAATGTAATAATGATGAACCTCACATCTTAGCTGGTGGTCTTAATTCGCTCAACGAAACCGATTATTCCCAAGAAAGATGGACAGATATTATAAAGTACTATGAAGAGATGGGGAAGCCAACGCCAAAATCTGATGTGATGAGATATCTAAAGAGTAAACAGTACACAGATGCAAAAGAATTTACTGGGGAATGCGAGTCAGTGGTCATGATTGCCAAAGGCCAAAGTGTTCAAGGAACTTGTAAGTATGGAACCAGGGTTGATTACATATTATCATCTTCAAATTCTCCTTACAAGTTCGTACCAGGGTCCTATCTGGTGCTTTCTTCCAAAGGGACATCAGATCATCACATAGTGAAAGTTGACGTTGTCAAAACAAGTAGGGATCCTGAAGAAAATATGACCAAGAAGCAGCGAAAGCGGAGGCAAAAAGTCGTGAGAATAACACAGTCAAATCAGTCAAAAGGTATATGGTCTACCAAAACTCAACACAAAGATTGA 1674 0.4546 MGRRVLSVLAFQAGIDLACMALSLSLCYPLLAKQLCNFKSQTTTTLSHALSPRRDPIQSHTHSPTMIKLFNKTLRRFCSNLRWPLRRRSSSKIIIKRFGKSHPKPLHDANRESSSNGFAIVHPNSQLGSPESQKPVRIATFNAALFSMAPALPKPEKGATFDDENGGAVKPRRPSDVKLRAKSANDRPKSILKQSPLHPNSMNSPDNLSNQPKFTKSKLRVSIDLPDNEISLLRSRQSSFSEYEKEGSNSNVVSKGKVAGKASVSFSGYTSNRTSSRTVLDVLRELDADILALQDVKAEEENEMKPLSDLASSLGMNYVFAESWAPEYGNAILSKWPIKRSRVQKIFDDTDFRNVLKATIEVPQAGEVNFYCTHLDHLDENWRMKQINAIIQCNNDEPHILAGGLNSLNETDYSQERWTDIIKYYEEMGKPTPKSDVMRYLKSKQYTDAKEFTGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSPYKFVPGSYLVLSSKGTSDHHIVKVDVVKTSRDPEENMTKKQRKRRQKVVRITQSNQSKGIWSTKTQHKD 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1371 557 MobiDBLite consensus disorder prediction 157 187 - -
Lele08g1371 557 MobiDBLite consensus disorder prediction 155 212 - -
Lele08g1371 557 Coils Coil 283 303 - -
Lele08g1371 557 MobiDBLite consensus disorder prediction 110 133 - -
Lele08g1371 557 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 134 540 - -
Lele08g1371 557 MobiDBLite consensus disorder prediction 101 133 - -
Lele08g1371 557 MobiDBLite consensus disorder prediction 519 557 - -
Lele08g1371 557 MobiDBLite consensus disorder prediction 188 212 - -
Lele08g1371 557 Pfam Endonuclease/Exonuclease/phosphatase family 274 507 IPR005135 GO:0003824
Lele08g1371 557 FunFam Endonuclease/exonuclease/phosphatase family protein 265 517 - -
Lele08g1371 557 Gene3D Endonuclease/exonuclease/phosphatase 263 517 IPR036691 -
Lele08g1371 557 SUPERFAMILY DNase I-like 272 514 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1371 Lele-ChrLele08 8782323 8786773 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1371 08 8782323 8786773 Lele08g1371 08 8782323 8786773 ECH
Lele05g1522 05 9764889 9769640 Lele08g1371 08 8782323 8786773 hybridization
Lele06g1373 06 8842581 8845634 Lele08g1371 08 8782323 8786773 hybridization