Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1360 ATGACACATGGTTCCGATCCTACCGCCATAAGCTCTGTGGCTCTGTTGTCATGCGTTCCACATTCTGAGAGACTTGACAATTCTCAGAAAGTCCGTAACTCCGTAATTTTCGGAAGTGGTGTTGCCGGCGAGTTTCTGCATTTTCCGTTAATTTTCCGTGTGGGAGAACAAATTAGAATTCAATCATGGGATAACATTCTGGAATTTCCGGTTGGTGGAATGCCTGGAAGGTGTGAAATATGTGCGATTCTCATTGCTATGTTTCTTTGTGCTCGTTTTTCCTGCAGATCCAGCACAAAGAAAATGGCGACTATTACAGACATCAGCCTTTCTGCAGCTATCAATCTCTTATCGGCATTTGCTTTCCTGTTTGCTTTTGCCATATTGCGACTGCAACCTGTTAACGATCGGGTTTACTTTCCGAAATGGTATCTGAAGGGGATAAGAGGCAGCCCAACTAGGAGAAACGTTCTTAACAGATTTGTTAATCTGGACATCAGGACATACTTAAAGTTCCTGAGCTGGATGCCTGCAGCGTTGAGTATGCCGCAACCAGAGCTTATAGATCACGCAGGGCTCGACTCTGCCGTCTATATTCGGATTTATCTTCTTGGCTTGAAGATATTCGTCCCAGTCACCTTAGTCACTTTACTCGTTTTGGTTCCGGTTAACTGGACGGGGAAACAATTGGAAAGTAGTAAAGACTTGACGTTTAGCAATATTGACAAGATTTCAATATCCAACATTTCACCTGGATCATCCATATTTTGGGTGCACAGTGGCATGTCATATCTCTTCACATTTTGGACGTGCTATTGTCTTTTCAAAGAATACAAGATTATAACGGACTTGAGATTGAGATTTTTGGCAGCTGAAAATCGTCGTCCAGACCAATTTACTGTCCTTGTGAGGAATGTTCCCCCGGATCCTGACGAGACACTCAGTGAGCATATCGAACATTTCTTTTGCGTTAATCATCCCGATAACTATCTGTTGCATAAAGTTGTCTATAATGCGAACAAGCTGGCATCGATAGTTGCGGAGAAGAAGGGATTGCAAAATTGGCTCATCTACTACCAAAACAAATTTGAACGAAGCCGTTCACAATCATTTAGGCCAACTACACGGACAGGCTTTCTAGGTCTCTTGGGAGAGAAAGTCGATGCTATTGATTATTATGCGGCGGAGATTGCCAGACTGAGTAAAGAAGAAGAGACAGAAAGAGAGAGGGTTTCAAGGGATCCCGAGGCACTAATTCCTGCAGCATTTGTTTCGTTCAGAACTCGATGGGGGGCAGCTGTGTGTGCTCAAACTCAACAATCTAGTAATCCTAGTATTTGGCTCACAGAATGGGCCCCTGAGCCTCGTGATGTCTGCTGGGAAAATCTTTCTATTCCATATGTTGAGCTCACCATTCGAAAATTGCTCATGGCTGTTGTTCTATTCTTCCTAATCTTCTTCTTCATGATACCAATAGCATTCGTCCAAACTCTAGCCAACATCGACTCCATTCAAAAGGCTTTTCCTTTCTTACGGTCATTGTTGCAAAAGCAATCTATCAAGTCTTTTGTACAGGGATTTCTACCAGGTCTGGCATTAAAGATATTTCTTATTTTGGTTCCAACAATTCTCATGCTCATGTCCAAAATAGAAGGACATAGATCGTTTTCATCTTTGGAGAGGACATCAGCTGCGAAATATTACCTTTTCGTTCTGGTCAATGTGTTCCTTGGCAGCATTGTAGCAGGAACGGCGTTTCAACAACTCGAAGAGTTTGTTAAAGGGGACTCAACAAAGTTCGCAAAAATGGCTGGCGCCACAGTCCCCATGAAAGCCACATTCTACATCACATATATAACGGTCGATGCAGCATTTTGGCCAGATGTACATCGTCGAGTGCTTATTGGCTTGGTCATATCTCAAATCCTTTTGATGGGATTGTTAAGCACAAAAGATGCCAAGAAGGAGACGCTTGCGCTTTTGGCACTACCTGTTTTTACGATATGGTTCTATGTGTATTGCAAAGGGCGCTTCGAATCGGACGCAATGGTGAAGGATACACTTGAAAAGGCAATTGAACCAACTCTGAACATAAGACTGTATCTTCAGGATGCTTACTTACACCCAGATTTCAAAGGAGGTGTTGTGGACAAACCACAAATTATTGATGAAGAGGAGAACAATCCACTCATCCAAACCAAGAGATCTCGCCGGAGTAGCAAGCAACAATCTGAGGTCGGAAGTTCCGAGGCTCTGATTACGCCTCCGGTCGGTAACATAACTAGATGTACTAGTATCAAAGAATGA 2307 0.4309 MTHGSDPTAISSVALLSCVPHSERLDNSQKVRNSVIFGSGVAGEFLHFPLIFRVGEQIRIQSWDNILEFPVGGMPGRCEICAILIAMFLCARFSCRSSTKKMATITDISLSAAINLLSAFAFLFAFAILRLQPVNDRVYFPKWYLKGIRGSPTRRNVLNRFVNLDIRTYLKFLSWMPAALSMPQPELIDHAGLDSAVYIRIYLLGLKIFVPVTLVTLLVLVPVNWTGKQLESSKDLTFSNIDKISISNISPGSSIFWVHSGMSYLFTFWTCYCLFKEYKIITDLRLRFLAAENRRPDQFTVLVRNVPPDPDETLSEHIEHFFCVNHPDNYLLHKVVYNANKLASIVAEKKGLQNWLIYYQNKFERSRSQSFRPTTRTGFLGLLGEKVDAIDYYAAEIARLSKEEETERERVSRDPEALIPAAFVSFRTRWGAAVCAQTQQSSNPSIWLTEWAPEPRDVCWENLSIPYVELTIRKLLMAVVLFFLIFFFMIPIAFVQTLANIDSIQKAFPFLRSLLQKQSIKSFVQGFLPGLALKIFLILVPTILMLMSKIEGHRSFSSLERTSAAKYYLFVLVNVFLGSIVAGTAFQQLEEFVKGDSTKFAKMAGATVPMKATFYITYITVDAAFWPDVHRRVLIGLVISQILLMGLLSTKDAKKETLALLALPVFTIWFYVYCKGRFESDAMVKDTLEKAIEPTLNIRLYLQDAYLHPDFKGGVVDKPQIIDEEENNPLIQTKRSRRSSKQQSEVGSSEALITPPVGNITRCTSIKE 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1360 768 MobiDBLite consensus disorder prediction 733 756 - -
Lele08g1360 768 Pfam Cytosolic domain of 10TM putative phosphate transporter 298 462 IPR027815 -
Lele08g1360 768 MobiDBLite consensus disorder prediction 727 756 - -
Lele08g1360 768 Pfam Late exocytosis, associated with Golgi transport 110 277 IPR032880 -
Lele08g1360 768 Pfam Calcium-dependent channel, 7TM region, putative phosphate 473 623 IPR003864 GO:0016020
Lele08g1360 768 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 623 736 IPR045122 GO:0005227
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1360 Lele-ChrLele08 8713105 8718606 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1360 08 8713105 8718606 Lele08g1360 08 8713105 8718606 ECH
Lele05g1510 05 9686524 9691758 Lele08g1360 08 8713105 8718606 hybridization
Lele06g1364 06 8768066 8772257 Lele08g1360 08 8713105 8718606 hybridization