Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1269 ATGCAGCAAGATGATAAGTACTACAAGCCCTCCTTCTCATTGATCCTCGTAGCCTCTTGCATCGGCCTCATATGTGCTTTCACATTGCATTTTTTCATGAAAAGGATCAGAGATCAGAGGATCATTCCACGAATCAGATTATCAAAAACAGGGCACGCCTTGAAGCTGGAAAGGTTCTCCCATTATGTAGCTAGGCAGCTAGGGTTAGATAGGAGAAATTGTCCACAACTATGTAAACTGGCATCAGAATACGTGAGAACATCCGAGGATTATGAAGATGATATATACGCATATTTTGCCAGCGAACCAGATGCAGATTCTTTATTTGTGAAACTTGTGGAGGAATTTGAGAGATGCATTCTTAGTTACTTTGCATTCCATTGGAGCCATGCTGATGTCATGATAAGTCAGGTGTTAAGTTGCGAAAGCGAACCCAAAAAGAAGCTAAAAAACATAGTTATGGCAGCAACCAGGGAACAAAGGTTCGAGAGGGTGACGAAGAATCTGAAGGTGGCTAGGGTTTTCAATACATTAGTGGAAGAGATGAAAGCAATGGGGCTGTCAACAAATGATGATTCTCAATGTACGGAGGTGATGGCTCCTGTAGCTCACAGTGATCGGAGTCCCGTGCTCCTCCTCATGGGTGGTGGCATGGGAGCAGGGAAGAGCACCGTGCTTAAAGAAATTCAAAAAGAACCTTTCTGGGCAGGAGCAAAAGGGAATGCCGTATTGATTGAAGCAGATGCCTTCAAAGAATCAGATGTCCTCTATAAGGCCCTTAGCTCTAGAGGGCATCATCACGACATGATTCGAACAGCTGAACTGGTCCACCAATCATCTACAGATGCAGCCTCGTCCCTGCTGGTAACAGCATTAAACGAAGGGAGAGATGTGATTATGGATGGCACTCTCTCTTGGGTACCATTTGTGGTGCAGACTATAACCATGACTAGATGTGTCCATCGCCATCGCTATCGCATGGGACCCGGTTATAGAGTGGCGGATGATGGAACTGTAACTGAGAACTACTGGGAACGAACGGAAGAAGTAGAACCGGAACAAAATGGAGGCAAAAAGAGAAAGCCATATAGGATAGAGCTGGTTGGAGTAGTATGTGATGCTTACCTTGCAGTGGTAAGAGGAATAAGGAGAGCTATCATGTGTAGAAGAGCAGTAAGAGTGAACTCTCAATTGAACTCCCACAAGAGATTTGCTGAAGCATTTCTGACTTACATTCAACTGGTAGACAATGCACGACTCTATGTAACAAATTCATTGGAAGGGCCCCATAAGTTGATAGGGTGGAAGGAGAGAGACAAGACGTTGCTGGTGGATCCGGACGAAATAGACTGCTTGAAGAAGGTTGCAAAGTTGAATAAGGAAGCCAACTCCATATATGAACTTTACAAGCACCCTCACCCAGCTCGGCACGCTGGATCAATATGGAAAGACATTGTGTTATCGCCCACCAGGTTGAACATCCAACAAGAGCTCAAGTATTCAATTCAAAAGGCCGAGAGATTGAAATGA 1530 0.4464 MQQDDKYYKPSFSLILVASCIGLICAFTLHFFMKRIRDQRIIPRIRLSKTGHALKLERFSHYVARQLGLDRRNCPQLCKLASEYVRTSEDYEDDIYAYFASEPDADSLFVKLVEEFERCILSYFAFHWSHADVMISQVLSCESEPKKKLKNIVMAATREQRFERVTKNLKVARVFNTLVEEMKAMGLSTNDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKEIQKEPFWAGAKGNAVLIEADAFKESDVLYKALSSRGHHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMTRCVHRHRYRMGPGYRVADDGTVTENYWERTEEVEPEQNGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVNSQLNSHKRFAEAFLTYIQLVDNARLYVTNSLEGPHKLIGWKERDKTLLVDPDEIDCLKKVAKLNKEANSIYELYKHPHPARHAGSIWKDIVLSPTRLNIQQELKYSIQKAERLK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1269 509 PANTHER UNCHARACTERIZED 4 508 IPR044802 -
Lele08g1269 509 Pfam Zeta toxin 203 305 IPR010488 GO:0005524|GO:0016301
Lele08g1269 509 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Lele08g1269 509 Gene3D - 191 431 IPR027417 -
Lele08g1269 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 343 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1269 Lele-ChrLele08 8077442 8079996 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1415 05 8974658 8977853 Lele08g1269 08 8077442 8079996 hybridization
Lele06g1274 06 8128122 8130648 Lele08g1269 08 8077442 8079996 hybridization