Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1027 ATGCAGGTTTTGTTGCACCTACTCAAAGCTGGATATTTTTTGCATAAAGGGGGACATAATAGTCCTAACGGAAGTCTAAAAGATTTTCCATTTCGAACAATTTATTTGGAGAGTCCTTGTGCATTTCTAGAGATAAACTCGTTTACTCGTGACACAGCAGCCATGGATGTGTGGGCCTTCCTTCTAACTTGCAAGGTGCAATATTGCTGTCTTTATGATCAAGGTTATACTTCAATTGGGAGCATACATGACACTGTTCCCAATGCATTATTAGGCATTGGCAATCCTTCCAATGAATTCAAACCCGCATATATGCTTTCTGATGGAAGACTAGAGAGAGCGGGGAGGGCTAAAAAGTCATCTACTTGGAGACAAATTCGCGCTAATAGCAATGGCTTGAATAGCTTCGACTTGCATGAAACTAGCTTACTGACAGCATCAGTAATTGTTGTGGGAGATGAGATTCTGTTTGGTATTGTTGAGGATCAGCTGGGACCTTCTTTGTGGAGGAAGTTGCATTCTGGTGGTTGGTCTGTGTCACAAGTTTCTGTTGTTCGCAATAATATAGATTCTGTTGCTGAAGAAGTTGAACAGCAGAAATCTACTTGTGATATGGTTATTATATGTGGAGGTGTAGGTCCATTGCATTCAGATGTTACATTAGATGGCATAGCCAAGGCTTTTGGCGTTCGTCTGGCTCCTGATGAAAATTTCAAAGAATATCTTAGGCATATTATGAATGATCAGTGCACTGGTGACTGGAATGAGATCAAATGTCAAAATGTAGTGGTTCTTTGTGCAACAAATGCTTTGGAGATGGAAGAGGAATGGGACTGTTTGATGGAGTTGACAAAATCTTCTGAGCTGTTCGCATTGCTGAAAGCCCATGTGTCAAAGAACGTGACAACAAACCTTTCAGATGTGGAAATTGCTCAACCTCTAACAAAGCTTTGTCTTGAATATCCTGATCTCTACATTGGGTGTTACCGCAAATCCAGATATAGATATTTGGTTGACCAAGCACGCGTTGAGTCAGCTGTAAAAGCATTATACAAGAAGTTTGGGCTACAGTTTTCATTGGAAATCCTCCGTCTGTACCGTTTAGTTAATGAAGCTTGCTTCACTCAAGATTATGACATAAATGTACCTCCTAGTTTTGGTTGCTGTCTGTAA 1173 0.4049 MQVLLHLLKAGYFLHKGGHNSPNGSLKDFPFRTIYLESPCAFLEINSFTRDTAAMDVWAFLLTCKVQYCCLYDQGYTSIGSIHDTVPNALLGIGNPSNEFKPAYMLSDGRLERAGRAKKSSTWRQIRANSNGLNSFDLHETSLLTASVIVVGDEILFGIVEDQLGPSLWRKLHSGGWSVSQVSVVRNNIDSVAEEVEQQKSTCDMVIICGGVGPLHSDVTLDGIAKAFGVRLAPDENFKEYLRHIMNDQCTGDWNEIKCQNVVVLCATNALEMEEEWDCLMELTKSSELFALLKAHVSKNVTTNLSDVEIAQPLTKLCLEYPDLYIGCYRKSRYRYLVDQARVESAVKALYKKFGLQFSLEILRLYRLVNEACFTQDYDINVPPSFGCCL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1027 390 SMART MoCF_biosynth_3a 147 287 IPR001453 -
Lele08g1027 390 Pfam Phosphoadenosine phosphosulfate reductase family 55 86 IPR002500 GO:0003824
Lele08g1027 390 Pfam Probable molybdopterin binding domain 148 254 IPR001453 -
Lele08g1027 390 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 165 259 - -
Lele08g1027 390 Gene3D - 143 298 IPR036425 -
Lele08g1027 390 Gene3D HUPs 53 120 IPR014729 -
Lele08g1027 390 SUPERFAMILY Molybdenum cofactor biosynthesis proteins 144 236 IPR036425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1027 Lele-ChrLele08 6513180 6517351 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1027 08 6513180 6517351 Lele08g1027 08 6513180 6517351 ECH
Lele06g1044 06 6468576 6476579 Lele08g1027 08 6513180 6517351 hybridization