Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0887 ATGGCTACAGACTTTGGTCAAAATGTCTTTTGGATATCTTTATGTTGCTCTCTGTATTTCGGCTTCACATGTGCCTCCTTCACACCAAGATTCCCTTCTTTAGCCTTTCGCCCACAGCGGCGGGTCGCTGATTCGGTCCAAAATACTGGGTTGTACAGAACAGAGTTCTACACTCAGATACTGGATCACTTCGATTTTGATCCCCAGAGTTACCAGACGTTTCAGCAAAGATATCTCGTCAACGACACTCACTGGGGAGGCGCCCCCAATAAAGCTCCCATCTTTGTCTACACCGGAAACGAAGGAGACATCGAATGGTTCACTCAGAACACTGGCTTTATGTTCGAAACAGCCCCCTATTTCAAAGCCCTTCTTGTGTTCATGGAGGCCTTGGCTGACTATGCCACCCTCGTCGTAGATCTCAAGAAGAATCTGTCTGCCACTGACTCCCCTGTTATCGTCTTTGGAGGATCCTATGGAGGAATGCTGGCGGCTTGGTTCAGGATGAAGTATCCCCACGTTGCCATTGGAGCCTTAGCATCCTCTGCTCCAATCCTCCAATTTTTGGATTTGGTTTCACCATATACCTTCATCGATATCGTCACACAAGACTTCAAGGTCTCTCTCTCCTCTCTTTCTCTCTCTATAACTGGATTAATTCGAGTGATAAAAGGTTCGTGGGAAGAGATACAAGGGGCAAGTAACAAGCCTGGAGGGCTAGAGATGCTGCGCAAATCCTTCGGAATATGCAAGAATTACATAAGCCCTGATGCTTTGACAGGTTGGCTTCGTGGGGCATGGATATCCACGGCCATGATGGATTATCCGGCCCCTTCCAATTTTATGAGCCCATTGCCAGCCTATCCCATGTGCGAGGCGATTGACCGGTCGGGAAGCGGAAACGACACGTTTGCCAAATTGCATGCCGCAGCCAGTATATACTACAATTACTCTGGCGATGCCGCGTGTTTTGATCTTCAGGATGATTCCGATCCTCATGGTCTCTCCGGATGGCAATGGCAGGGGATTGAGAGGGTGCTGAAAAGGTCGGGCGGCAACATTATATTCTTTAATGGCTTAAGAGACCCCTGGAGTGGCGGAGGGGTGTTGAAGAATATTTCACAGACCGTGGTCGCCATTGTGGCCAAACAAGGAGCTCATCACGTAGACCTGAGGTTCTCCACGGAGCAAGATCCGCAGTGGCTGAGAGATGTGAGGAAGCAAGAGGTGGACATCATATCCGGTTGGATCTCTCAGTATCATCAAGACCTGGCCCACTGA 1281 0.4926 MATDFGQNVFWISLCCSLYFGFTCASFTPRFPSLAFRPQRRVADSVQNTGLYRTEFYTQILDHFDFDPQSYQTFQQRYLVNDTHWGGAPNKAPIFVYTGNEGDIEWFTQNTGFMFETAPYFKALLVFMEALADYATLVVDLKKNLSATDSPVIVFGGSYGGMLAAWFRMKYPHVAIGALASSAPILQFLDLVSPYTFIDIVTQDFKVSLSSLSLSITGLIRVIKGSWEEIQGASNKPGGLEMLRKSFGICKNYISPDALTGWLRGAWISTAMMDYPAPSNFMSPLPAYPMCEAIDRSGSGNDTFAKLHAAASIYYNYSGDAACFDLQDDSDPHGLSGWQWQGIERVLKRSGGNIIFFNGLRDPWSGGGVLKNISQTVVAIVAKQGAHHVDLRFSTEQDPQWLRDVRKQEVDIISGWISQYHQDLAH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0887 426 Gene3D alpha/beta hydrolase 299 421 IPR029058 -
Lele08g0887 426 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 46 129 - -
Lele08g0887 426 Gene3D alpha/beta hydrolase 130 242 IPR029058 -
Lele08g0887 426 Gene3D alpha/beta hydrolase 51 129 IPR029058 -
Lele08g0887 426 SUPERFAMILY alpha/beta-Hydrolases 130 391 IPR029058 -
Lele08g0887 426 Pfam Serine carboxypeptidase S28 349 407 IPR008758 GO:0006508|GO:0008236
Lele08g0887 426 Pfam Serine carboxypeptidase S28 129 320 IPR008758 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0887 Lele-ChrLele08 5598699 5602734 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0887 08 5598699 5602734 Lele08g0887 08 5598699 5602734 ECH
Lele05g1036 05 6455065 6457989 Lele08g0887 08 5598699 5602734 hybridization
Lele06g0898 06 5578845 5581817 Lele08g0887 08 5598699 5602734 hybridization