Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0826 ATGACATGGTCAAGCTCTGTGCTTCCTTTGGCTCTCGCAGTTTCTGCTGGATCACTTGCTTTTCAAACCCAGTTCCATCCTTCATTATGTGACGCTCCTAATTCCAATAGTCGAGGTGCCAGCTCGGGGGGAAAAGGTAGCACCCAGTTTGTGGTTAAGAGATCACAAAAAGAAATTCCGCAGGATCTTGTCCAGGAGTTGAAGGCCATCTGTCAGGATAACATGACACTTGATTACGATGAGAGATATATCCATGGAAAACCACAGAATAGCTTTCACAAGGCTGTTAACATACCTGATGTAATTGTTTATCCAAGATCTGAAGAGGAAGTCTCCAAGATTGTTAAAGCATGTAACAATCATAAGGTTCCTATTGTACCCCACGGCGGTGCTACATCAATTGAGGGTCACACCTTATCCCCTAATGGAGGGGTTTGCATTAACATGGCGTTAATGAAAAGAGTGAAAGCATTACATGTTGAAGACATGAATGTGGTTGTTGAGCGTGGAATTGGATGGATGGAGCTTAATGAGTACTTGGAACCTTATGGTCTATTTTTTCCACTTGATCCAGGCCCTGGTGCAATCATAGGAGGCATGTGTGCCACTCGCTGTTCTGGTTCATTGGCTGTCAGGTATGGAACTATGCGTGACAATGTCATCAGTCTCAAGGTAGTTCTTGCCAATGGAGATATAGTTAAGACAGCATCTCGTGCTAGGAAGAGTGCTGCAGGGTATGATTTGACCCGCTTGATGATTGGAAGTGAAGGAACTCTTGGTGTAATAACAGAAGCAACACTGAGGCTTCAGAAAATTCCCCAGCATTCAGTGGTGAGTTGTTATTTTCTTTCATTCATTGAATGTGCTATTTTCTCTCCATCTTTTCTCAGTTTCCCTTCTGTAAAGGATGCAGCAGATGTTGCTATTGCCACTATGATGTCTGGTATACAGGTTTCAAGGGTAGAGCTATTGGATGAAGTTCAAGTGAAAGCTATCAATATTGCTAATGGCAAGAATTTGCCTGAATCTCCAACGTTAATGTTTGAATTTATAGGAACAGAGGCATACGCTCGTGAACAAACACAAATTGTTCAGAGAATTGTTTCTGAACACAGTGGCTCAGGTTTTGCATTTGCAGAAGAGCCTGAAGCCAAAAAAGAACTCTGGAAGATAAGGAAGGAAGCTCTTTGGGCATGCTTTGCAATGAAGCCTGATTTGGAGGCAATGATTTCGGACGTATGTGTGCCTCTATCTCGCCTTGCAGATTTAATTTCAAGGTCCAAAAAGGAACTGGATGCTTCTTCACTGGCGGGTGATGGTAATTTCCACACAGTTATTCTATTTGACCCTACCCAAGAAGAACAACAGCTGGAGGCAGAGAGACTAAATCAATTTATGGTTCATGCTGCCTTGTCATTGGAAGGAACTTGTACTGGTGAACATGGAGTTGGCACTGGGAAAATGAAGTACCTGGAAGAAGAACTGGGAATAGAAGCATTGAGGAAGATGAAGAAAATAAAGGCAGTCTTGGATCCCAACAATATCATGAATCCTGGAAAGCTCATTCCTCCGCACGTTTGTTTGTAA 1587 0.4279 MTWSSSVLPLALAVSAGSLAFQTQFHPSLCDAPNSNSRGASSGGKGSTQFVVKRSQKEIPQDLVQELKAICQDNMTLDYDERYIHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVKACNNHKVPIVPHGGATSIEGHTLSPNGGVCINMALMKRVKALHVEDMNVVVERGIGWMELNEYLEPYGLFFPLDPGPGAIIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGVITEATLRLQKIPQHSVVSCYFLSFIECAIFSPSFLSFPSVKDAADVAIATMMSGIQVSRVELLDEVQVKAINIANGKNLPESPTLMFEFIGTEAYAREQTQIVQRIVSEHSGSGFAFAEEPEAKKELWKIRKEALWACFAMKPDLEAMISDVCVPLSRLADLISRSKKELDASSLAGDGNFHTVILFDPTQEEQQLEAERLNQFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGIEALRKMKKIKAVLDPNNIMNPGKLIPPHVCL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0826 528 Gene3D - 407 481 - -
Lele08g0826 528 FunFam D-lactate dehydrogenase [cytochrome], mitochondrial 61 307 - -
Lele08g0826 528 MobiDBLite consensus disorder prediction 32 51 - -
Lele08g0826 528 SUPERFAMILY FAD-linked oxidases, C-terminal domain 295 524 IPR016164 GO:0003824|GO:0050660
Lele08g0826 528 PANTHER D-LACTATE DEHYDROGENASE 41 524 - -
Lele08g0826 528 Pfam FAD linked oxidases, C-terminal domain 296 521 IPR004113 GO:0003824|GO:0050660
Lele08g0826 528 FunFam D-lactate dehydrogenase mitochondrial 407 481 - -
Lele08g0826 528 Pfam FAD binding domain 99 235 IPR006094 GO:0050660
Lele08g0826 528 ProSiteProfiles PCMH-type FAD-binding domain profile. 95 272 IPR016166 GO:0071949
Lele08g0826 528 Gene3D - 482 522 IPR016171 -
Lele08g0826 528 Gene3D - 60 287 IPR016169 -
Lele08g0826 528 SUPERFAMILY FAD-binding/transporter-associated domain-like 58 273 IPR036318 GO:0050660
Lele08g0826 528 FunFam D-lactate dehydrogenase mitochondrial 482 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0826 Lele-ChrLele08 5192752 5202997 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0826 08 5192752 5202997 Lele08g0826 08 5192752 5202997 ECH
Lele05g0977 05 6031072 6040038 Lele08g0826 08 5192752 5202997 hybridization
Lele06g0837 06 5184158 5191921 Lele08g0826 08 5192752 5202997 hybridization