Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0824 ATGCTTCAGTGTCTGTCAAAATCAAAGACCATGTTCACTGCAAGACCATCCCCTCTGGGTACTTTCGTTCTGGTTCTTATCCTCTGCATTCTGGGCTTTTATACCGTGAATCGCCCCCACTCTTTTTCGCCGTCTTTCACATCCCATAATGCGTCTCACTGCCGCCATATTTTTCTCTCCTCTTCCTCTAACTCCACCATCGCCTCCTACCTCCGTGACCTCACCCAGCACCCTCACCTTGCCGGAACAAAACTCGGCTCCGACACCGCCAGTTATGTTCTCAACCACTTCAGAGACCTTGGCCTTCAGACCCACACTGTGAACTACAAAGCGCTCCTCTCCTATCCCCTGCACTCCTCCATCTCGGCGCATTTTAGCAACGGGTCCTGCTCGGAGTTTCCTTTAGGGGAAACGGTTCGGCCCAATCAGGTTGACCAGGACGTGGTGCCACCTTACCATGCTTACTCGCCATCTGGTTCGGCGTATGCGAAGGCTGTTTTCGTGAATTATGGGAGGGTCGAGGATTACCGTGCGCTCGGCGTGCTAGGAGTGAACGTTACCGGATGCATAGTGATTGCTAGGAAAGGTGGCGGTCTGACCAGAGGCGCGGTGGTGGAGAAGGCGGAGGCTTACGGTGCGGTGGCGGTGCTGATATATGCCGATGTTGATGGGTTTGGTAAAGGGTTCGAGAGAGGACACGTCATGAGAGGCATAGGGGACCCACTAACCCCTGGGTGGGCTGGTATTGAGAGCGGCGAGAGCTTGGATTTGGAAGATAGTGAGGTTTTGAAAAGGTTTCCTAAAATTCCATCCATGCCCCTTTCCACTGAGATCGCTAAGACCATTTTACACTCGCTAGTAGGCGCTGAGGTGCCACAGGAGTGGAAGAGTTCACTAGGGTCCAATGTCAGACTCACGCATGTTGGTCCTGGCCCGACAATGCTCAATTTCACGTATCAGGGGGAAAAGAAGGTGGGTACCATTGAAAACGTCTTCGCGGTCATAAAGGGATCAGAAGAACCCGATCGTTTTGTGCTGCTCGGGAACCACCGGGATGCCTGGACATATGGTGCTGTAGATCCCAGCAGTGGGACTGCAGCCCTGCTCGACATTGCTCGGCGATTTTCTCTTCTATTGCGCATCGGGTGGAATCCACGAAGGACCGTAATCCTCTGCGGTTGGGATGCTGAGGAGTTCGGAATGATTGGATCCACCGAGTGGGTGGAGCAGAACCTTGTCAATCTAGGCTCCAAAGCAGTTGCATATCTCAATGTTGACTGTGCTGTCCAAGGGCCTGGTTTCTTTGCCAGCTCTACTCCTCAGCTAGATGATCTCATTCTTGAGGTCACAGAGAAGGTTAAGGATCCTGACGCCAAGGGTGCGACACTATACGAAAATTGGGCAGCTGCTGATGGAAATTCTAACATTTTGAGGCTCAATGGACTAGATTCTGATTTTGCGCCATTTGTGCAGCATGCCGGTGTTCCATCAATTGATTTGTATTATGGATCAGATTTTCCTGTCTATCACACTGCTTTTGACTCCTACAACTGGATGGCACAATATGGAGATCCATTCTTTCAGCGGCATGTGGCTGTTGCTGGAGTTTGGGGACTTCTAGCACTTCACCTGGCTGATGATCCCATTCTTCCGTTTAATTACCATTCTTATGTAGATCAGTTACAGGCATACAGGAACAGACTGGGCAACCTTTTAGACCAATCAATCTCTCTGCAACCATTAACTACCTCGATACAAGACTTTGCGTCAGCTGTTGAAGAATTTGATGATGAATTAAATGCACTGAGATTACAAGAAGCCGCTGATTGTTTTGTGCATTCAAAAGAGCGAGCGTTAAATGATAGACTAATGCTTGCTGAAAAAGGCTTCCTGGATCCAGATGGACTTAGAGAAAGGACCTGGTTCAAACATCTTGTGTTTGGGCCTCCAAGCGACCATGAAAGTAAGATGGATTTCTTCCCCGGAGTTGCTGATTCTATTGCTTGGTCAGCCAAAAATAGTGAAAAAGAAGGGCAGGCAGCAATTAGACATGAGATCTGGAAGGTTGCCAGAGCCATCAAAAGAGCTGCTTCAGCTCTGAGGGGAGAGTTCACGTAA 2118 0.4967 MLQCLSKSKTMFTARPSPLGTFVLVLILCILGFYTVNRPHSFSPSFTSHNASHCRHIFLSSSSNSTIASYLRDLTQHPHLAGTKLGSDTASYVLNHFRDLGLQTHTVNYKALLSYPLHSSISAHFSNGSCSEFPLGETVRPNQVDQDVVPPYHAYSPSGSAYAKAVFVNYGRVEDYRALGVLGVNVTGCIVIARKGGGLTRGAVVEKAEAYGAVAVLIYADVDGFGKGFERGHVMRGIGDPLTPGWAGIESGESLDLEDSEVLKRFPKIPSMPLSTEIAKTILHSLVGAEVPQEWKSSLGSNVRLTHVGPGPTMLNFTYQGEKKVGTIENVFAVIKGSEEPDRFVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSLLLRIGWNPRRTVILCGWDAEEFGMIGSTEWVEQNLVNLGSKAVAYLNVDCAVQGPGFFASSTPQLDDLILEVTEKVKDPDAKGATLYENWAAADGNSNILRLNGLDSDFAPFVQHAGVPSIDLYYGSDFPVYHTAFDSYNWMAQYGDPFFQRHVAVAGVWGLLALHLADDPILPFNYHSYVDQLQAYRNRLGNLLDQSISLQPLTTSIQDFASAVEEFDDELNALRLQEAADCFVHSKERALNDRLMLAEKGFLDPDGLRERTWFKHLVFGPPSDHESKMDFFPGVADSIAWSAKNSEKEGQAAIRHEIWKVARAIKRAASALRGEFT 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0824 705 Coils Coil 585 605 - -
Lele08g0824 705 Gene3D - 119 321 - -
Lele08g0824 705 SUPERFAMILY Zn-dependent exopeptidases 62 550 - -
Lele08g0824 705 CDD M28_PSMA_like 327 552 - -
Lele08g0824 705 Pfam PA domain 163 226 IPR003137 -
Lele08g0824 705 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 19 702 IPR039373 -
Lele08g0824 705 SUPERFAMILY PA domain 112 332 IPR046450 -
Lele08g0824 705 Gene3D - 553 705 IPR036757 -
Lele08g0824 705 Gene3D Zn peptidases 65 551 - -
Lele08g0824 705 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 552 703 - -
Lele08g0824 705 FunFam Os01g0740650 protein 321 551 - -
Lele08g0824 705 SUPERFAMILY Transferrin receptor-like dimerisation domain 551 703 IPR036757 -
Lele08g0824 705 Pfam Transferrin receptor-like dimerisation domain 576 700 IPR007365 -
Lele08g0824 705 Pfam Peptidase family M28 330 517 IPR007484 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0824 Lele-ChrLele08 5175392 5180517 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0824 08 5175392 5180517 Lele08g0824 08 5175392 5180517 ECH
Lele05g0974 05 6010181 6010825 Lele08g0824 08 5175392 5180517 hybridization
Lele06g0835 06 5166618 5171751 Lele08g0824 08 5175392 5180517 hybridization