Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0692 ATGGGGTTGTTACCTTCTGTTTGTTTTGAACATAGCAGGTTCTTATTTTTTACAGTCCTCGTAGTTGTGACCCTGAACTGTTTACCAGTTAAAGCTAACCTATGCAGCAATAACTCTGTTGCTACCCCAAGAATTCCTACCTATAACGATATTCTTTCATCATTGCAAACACTAGCTCTTGATGGTTACTTCAGTTTGGAAGACAATGGACATGCAGCCAAAGACTTTGGTAACATATACCATTGTCCTCCTCTGGCAATTCTGCATCCAAGAGCAGTTTCTGATATCTCAAGCACAATAAAGCATATTTTTGAAACGGATTCTTCTTCAGAACTAAAGATTGCAGCTAGAGGCCACGGTCACTCTCTTCAAGGTCAAGCACAGGCATATCAAGGCCTAGTTGTGAACATGGAGTCACTGGAGGGACCAGAAATGACTGTTCATGGTGGAGAATTTCCTTACGTGGATGTTTCTGCCGGTGAGTTATGGATAAACATTCTGCATGAGACTCTTAAGCATGGGTTGGCACCTAAATCTTGGACAGATTATCTTCATCTTACTGTTGGGGGAACTCTATCAAATGCTGGAATAAGCGGACAAGCCTTCAGGCATGGACCCCAGATCGATAACATCTTCCAGCTGGAAGTAGTCACAGGAAAAGGAGATGTGCTTACCTGCTCAGAGAACCAGAATGCTGACCTTTTTTATGGCGTTCTTGGTGGGCTTGGTCAATTTGGAATCATAACCAGGGCTAGAATTTCTCTTGAACCAGCGCCAATGAAGGTGAAATGGATTAGGGGGTTGTACTCAGAATTTTCAGTATTTGCAAGGGATCAAGAGTACTTGATATCGCTTGAAAATACATTTGATTATGTTGAAGGGTTCGTAATCATAAACAGAACGGGCATTCTTAATAACTGGAGGTCATCCTTTAATCCCGAAGACCCGCTTCAAGCCAGCCAATTCAATTCAGATGGGAAGACCTTCTATTGTCTTGAGGTGGCAAAATACTTCAACCCCGACGAAACTGAAGCCATGAATCAGGAAGTTGAGAGACTGTTATCAGAACTGAGCTATATTCCATCGACACTATTCCTATCAGAAGTTTCTTACGTGGATTTCCTGGACAGAGTGCATGTTTCTGAGATGAAGCTAAGAGCCAAAGGCTTGTGGGAAGTTCCCCATCCTTGGCTCAATCTTCTGATCCCAAGAAGCATAATTCATGAGTTTACACATCAGGTGTTTGAGAAAATTCTCGTGGATACAAGCAATGGCCCCATACTCATATACCCCGTCAATCAATCAAGGTGGAACCATAGAACATCTTTGATTACACCAGAGGAAGATGTTTTCTACATGGTAGCATTTCTTTCTTCGGCCGTACCATTGTCAACAGGGAAAGACAGCTTAGAATACATTGCAAGCCAAAACGAAAGGATCATAGAGTTCTGCGAGCACGCTCAGCTAGGAGCGAAGCAATATCTTGCACATTACAGGACAAGAGAGGAATGGGAAGGGCACTTTGGGACAAGATGGGCAGTGATGAGACGAAGAAAATCAGAGTATGACCCATTGGCAATTCTTGCCCCTGGCCACAGAATCTTTCAAAAGCCAACATCCACCACCTCCTTTTGA 1635 0.4312 MGLLPSVCFEHSRFLFFTVLVVVTLNCLPVKANLCSNNSVATPRIPTYNDILSSLQTLALDGYFSLEDNGHAAKDFGNIYHCPPLAILHPRAVSDISSTIKHIFETDSSSELKIAARGHGHSLQGQAQAYQGLVVNMESLEGPEMTVHGGEFPYVDVSAGELWINILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGQAFRHGPQIDNIFQLEVVTGKGDVLTCSENQNADLFYGVLGGLGQFGIITRARISLEPAPMKVKWIRGLYSEFSVFARDQEYLISLENTFDYVEGFVIINRTGILNNWRSSFNPEDPLQASQFNSDGKTFYCLEVAKYFNPDETEAMNQEVERLLSELSYIPSTLFLSEVSYVDFLDRVHVSEMKLRAKGLWEVPHPWLNLLIPRSIIHEFTHQVFEKILVDTSNGPILIYPVNQSRWNHRTSLITPEEDVFYMVAFLSSAVPLSTGKDSLEYIASQNERIIEFCEHAQLGAKQYLAHYRTREEWEGHFGTRWAVMRRRKSEYDPLAILAPGHRIFQKPTSTTSF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0692 544 Gene3D - 137 260 IPR016169 -
Lele08g0692 544 ProSiteProfiles PCMH-type FAD-binding domain profile. 80 258 IPR016166 GO:0071949
Lele08g0692 544 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 259 535 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lele08g0692 544 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 84 119 IPR006093 GO:0016491
Lele08g0692 544 Gene3D - 261 494 IPR016170 -
Lele08g0692 544 SUPERFAMILY FAD-linked oxidases, C-terminal domain 261 535 IPR016164 GO:0003824|GO:0050660
Lele08g0692 544 FunFam Cytokinin dehydrogenase 2 261 494 - -
Lele08g0692 544 FunFam Cytokinin dehydrogenase 1 137 260 - -
Lele08g0692 544 Gene3D - 69 535 IPR016167 -
Lele08g0692 544 PANTHER GULONOLACTONE OXIDASE 44 536 - -
Lele08g0692 544 Pfam FAD binding domain 84 227 IPR006094 GO:0050660
Lele08g0692 544 SUPERFAMILY FAD-binding/transporter-associated domain-like 67 257 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0692 Lele-ChrLele08 4259233 4261322 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0693 06 4233772 4236735 Lele08g0692 08 4259233 4261322 hybridization