Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0656 ATGGGCTGCTCTGCCTCAAGACCCGTCACCATTGTCGCCAAAAACCAAGAGGATCGCTCTTCTTCTCTGGCTTCGTCTTCTTCAGCTTCACATTCATCCAGTTCTTCTTCGCCACCTGTTCCCAGAGCTCTTTCTCTCCCAATGCCTCTTGTTCATCATCCTCCGACTAGAAAAGGCGACACCCACCACCTTGTATCCCTCACCTCCACCACCTACGGTTCTCTTGTTTTAAACGACCCATCCGACCTTAAAAACCCTAACTTCAGCTCCGATGATTGTCATGTGCGGTTGGAATATCCGACCCATCAGGCAGAGGCTGAACAGTCATTGTCCCCTGACTCTGTCATCAACACTTGGGAACTCATGGATGGCCTCAACGATGATGAGTGCGATGACGCTACCAAGCCTCAAGCTTCGATTTTTCACCGCCCCGTTTGTGTTTCGAATAAACCAAGTTCGTGCAGGTACACTACATTTGATGAGTCTGCGAAAAGAGTACTACTTGAATCGCTTGAACCACCACTGAAATATTATTCGTCGGAAGTTGTCACTGAAAACTCTTCCCCTTCGTCGGCTGCCAAGAAGCCGCTTTGGCAATACTTATCGGAGGAAGCCTTACTCTCTAAATTAGATCCAAACGTGGCTTGGAGCTACCGGCGAGCTCTCTCATCAAGGCAATTAGGCACCATTGTACCCAGAAACGTGCGTTCATTAGGGTCAAGCCCTATGAGTTCGTCGTTTTCTTACAATACGCGTCGTTTACAAGCGAGCACTGAAGAGAGAATAGTTGTTTATTTTACGAGTTTAAGAGGAATCCGCAAGACTTATGAAGATTGCTGTTCAGTGAGGACGATACTGCGAGGATTCAGAGTTGCAGTAGATGAAAGGGACATATCGATGGACGCATCTTACAGAAAAGAACTGCAAAATGCTCTGAAAGGCAAACCAATGACATTACCACAGATCTTTATAAGGGGAAAACATGTTGGAGGAGCAGAGGAGATTAAGCAAATGAATGAATATGGGGAATTAGCGAAGATGTTGAAAGGGTTTCCAATTCAGGATACAGGGTTTGTGTGCGAGACTTGTGGAGATGCAAGATTTGTGCCTTGCCCTAATTGCAATGGAAGTAGGAAAGTAGACAGAGGCTTTTCTATTCCCTCCTCTGAAATCGACGTCTCTCTCGCCGAATTTCGAGCCATTCACGGTCAATCCCCTGACATTGAACGCCTCCGCTTCTCCGCCACTCATGCCTCTGACTCTTCCAAGCGGGTAACTCTCTTAAGCCTTTCACTAGTTAGGGATTGCAATGTTGCTAGTTCTCGTAGCGATTCTCAGTCCACTGTTGGCATTCCCCACATGAAACCCTTTTTCGCATTTCATAGACGTCTCCTGATGTCAGAGATAAGTGGAATAATCTCTGAAATTACTGTTCCCAGCATTTTGGTCACTTTCTGCTGGCCTGGTGTTGTAAAAGTTAATGTGATCCGGAGCCTTGCTGGTCAGCTGTTTAACACAGACACTTTATCTGGGATGATATTGATAGTACAGGACCAAATTACTAGCCAGGCCTTGAAAGCTTTAGAAGTTTTCAAATTCAAGGTTGAAGTTTTCCAGGCATGCAGCTTTGATGCTGAATGCCTGGATAAGTATCACAGCCCTGATTTATCTAGGATCACTGATTTACTTGTTAACATTACAAAGCATGTCTTGAAGCCAAAGCATGAGGTGCTGACTGATCGACAGAAGCAAGAGCTTTTGAAGCAATACAATTTAGAAGAAAAGCAGCTTCCCCGCATGCTGCAGAAAGATGCCATTGCGCGGTACTATGGACTGGAGAGGGGACAAGTGGTTAAAGTCACCTATAGTGGTGATATCTCCCAGATGCATGTCACATACCGATGTGTTTGGTTAGCTGTTCAGTCATACAGAAGCGTCAAATTTCAATTTCCTACTAGTGCCATGTTTATAATTGCACAAACTTCATTCCTAGCTGTTTGCATCATGCTGTATGTGGAGCTGTGA 2025 0.4538 MGCSASRPVTIVAKNQEDRSSSLASSSSASHSSSSSSPPVPRALSLPMPLVHHPPTRKGDTHHLVSLTSTTYGSLVLNDPSDLKNPNFSSDDCHVRLEYPTHQAEAEQSLSPDSVINTWELMDGLNDDECDDATKPQASIFHRPVCVSNKPSSCRYTTFDESAKRVLLESLEPPLKYYSSEVVTENSSPSSAAKKPLWQYLSEEALLSKLDPNVAWSYRRALSSRQLGTIVPRNVRSLGSSPMSSSFSYNTRRLQASTEERIVVYFTSLRGIRKTYEDCCSVRTILRGFRVAVDERDISMDASYRKELQNALKGKPMTLPQIFIRGKHVGGAEEIKQMNEYGELAKMLKGFPIQDTGFVCETCGDARFVPCPNCNGSRKVDRGFSIPSSEIDVSLAEFRAIHGQSPDIERLRFSATHASDSSKRVTLLSLSLVRDCNVASSRSDSQSTVGIPHMKPFFAFHRRLLMSEISGIISEITVPSILVTFCWPGVVKVNVIRSLAGQLFNTDTLSGMILIVQDQITSQALKALEVFKFKVEVFQACSFDAECLDKYHSPDLSRITDLLVNITKHVLKPKHEVLTDRQKQELLKQYNLEEKQLPRMLQKDAIARYYGLERGQVVKVTYSGDISQMHVTYRCVWLAVQSYRSVKFQFPTSAMFIIAQTSFLAVCIMLYVEL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0656 674 Gene3D - 379 542 IPR036710 GO:0003677|GO:0003899|GO:0006351
Lele08g0656 674 Gene3D Glutaredoxin 260 351 - -
Lele08g0656 674 MobiDBLite consensus disorder prediction 1 62 - -
Lele08g0656 674 MobiDBLite consensus disorder prediction 9 41 - -
Lele08g0656 674 SUPERFAMILY Thioredoxin-like 258 349 IPR036249 -
Lele08g0656 674 ProSiteProfiles Glutaredoxin domain profile. 250 355 - -
Lele08g0656 674 Pfam RNA polymerase Rpb5, C-terminal domain 564 636 IPR000783 GO:0003677|GO:0003899|GO:0006351
Lele08g0656 674 CDD GRX_GRX_like 261 380 - -
Lele08g0656 674 Pfam Glutaredoxin 263 329 IPR002109 -
Lele08g0656 674 SUPERFAMILY RPB5-like RNA polymerase subunit 562 637 IPR035913 -
Lele08g0656 674 Gene3D - 559 637 IPR035913 -
Lele08g0656 674 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 380 539 IPR036710 GO:0003677|GO:0003899|GO:0006351
Lele08g0656 674 FunFam DNA-directed RNA polymerases I, II, and III subunit RPABC1 562 637 - -
Lele08g0656 674 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 61 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0656 Lele-ChrLele08 3999133 4007003 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0656 08 3999133 4007003 Lele08g0656 08 3999133 4007003 ECH
Lele05g0813 05 4868981 4870225 Lele08g0656 08 3999133 4007003 hybridization
Lele06g0661 06 3962930 3964126 Lele08g0656 08 3999133 4007003 hybridization