Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0570 ATGTCTCTTTCTGATTATTCGGCAAAATGGCCGACCAAATCTGCTGAAAAGCTCGTTTCTATCATCACTTTCATCGTTTTCCTCGTTCTTGATTTCCTGGACAACGTTTTTTGCCTTATATATAAATACCTTGATGATTATATTGAAGGGGAGGCCCCCGCGTGTTGCTGCGGAAACAGGGGTAAGCGCCAGGAGAATACCGAAGATGACCAGGAGTGTGAGCCTTCAGATACATTGTACAGGAGAAAAAACTTGTTCAGGGAAATGGGTTTACTTCGAATTCGAAGGAAATCAGAAGATTCCGAGACAAAATGCAGGGGAGGTAGGTGGTCGATGAACCGTTGGTCTGATTGTGGGTGCGAGTCGTGCATTTCGTGGGCGAGTAATGGTGATAACAAGCTTCATTTTGTGGTGAACGAGCCCTCAATAGGTAAATTTCGAGCCTGTGTTTCTGTTCCCTTTTTGTATTATACTACAAAATGTAGTTCTAGTTCATTGAGTTGCTCATTTAAGTTCAAATTTTTATGTATGACAGCTAGTGATGAGAACTGCAAGGGAATGCCTTCTGAGAATGTGGTCTTCTTGCATGGGTTTCTATGTTCTTCTTCATTCTGGACAGCGACGGTTTTCCCAAATTTTTCGGAACAAGTAAAGCAGAATTACCGATTGATTGCGGTAGATTTGCTGGGATTTGGTAGGAGCCCGAAGCCAAGTAATTGCTCCTACACTCTGAAAGATCATGTGGGAATGATAGAGAAATCCGTGGTTCAACCATTGAATCTAAGTTCGTTTCATGTGGTAGCACACTCTATGGGTTGCGTAATTGCGCTGGCTTTGGCTTCAAAGTACCCCAAGCGTGTTAAATCCATCACCCTGGTTGCCCCCCCGTACTTTCCTTCTGGTGGGAATGATGCTAGTTTAAATGCACTCAAAAAACTTGCTGGGAAGAAACTGTGGCCGCCATTGGCATTCGGTTCCTCCTTGATGTCGTGGTACGAGCACTTGGGTCGATTCGTCTGCCTCATGTTTTGCAGAAATCACAGGATATGGGAGAAGATCATAAAGTTGTTTACTTTCAGAAGAGATGTTCATTTCTTGACCGTAGACTTGACGAGGCACACCCATCATTCAGCTTGGAGTTCGATGCACAATGTGATATGTGGGGGAGCGAAATTCATGGAGAGGTACGTGGAGATTTTGAGTGAAGGTGGAGTGAGAATGAATGTGGTACGAGGTGATAAAGATGCGGTGGTGCCGTTGGAGTGCTGCTATAACTTGAAGAAGAAGGCTGCAGAAGCTGAGGTGAGCATGATAAGAAATGCAGACCATGGGAGTGTAATCTTGGGGAGAGAGAAGGCATTTGTTCATTACCTAGAGGAAATTTGGTCCCAGCCATGTTGTCCTTAA 1407 0.4442 MSLSDYSAKWPTKSAEKLVSIITFIVFLVLDFLDNVFCLIYKYLDDYIEGEAPACCCGNRGKRQENTEDDQECEPSDTLYRRKNLFREMGLLRIRRKSEDSETKCRGGRWSMNRWSDCGCESCISWASNGDNKLHFVVNEPSIGKFRACVSVPFLYYTTKCSSSSLSCSFKFKFLCMTASDENCKGMPSENVVFLHGFLCSSSFWTATVFPNFSEQVKQNYRLIAVDLLGFGRSPKPSNCSYTLKDHVGMIEKSVVQPLNLSSFHVVAHSMGCVIALALASKYPKRVKSITLVAPPYFPSGGNDASLNALKKLAGKKLWPPLAFGSSLMSWYEHLGRFVCLMFCRNHRIWEKIIKLFTFRRDVHFLTVDLTRHTHHSAWSSMHNVICGGAKFMERYVEILSEGGVRMNVVRGDKDAVVPLECCYNLKKKAAEAEVSMIRNADHGSVILGREKAFVHYLEEIWSQPCCP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0570 468 Pfam alpha/beta hydrolase fold 192 298 IPR000073 -
Lele08g0570 468 SUPERFAMILY alpha/beta-Hydrolases 190 445 IPR029058 -
Lele08g0570 468 PANTHER HYDROLASE 26 455 - -
Lele08g0570 468 PRINTS Alpha/beta hydrolase fold signature 220 235 IPR000073 -
Lele08g0570 468 PRINTS Alpha/beta hydrolase fold signature 266 279 IPR000073 -
Lele08g0570 468 PRINTS Alpha/beta hydrolase fold signature 280 293 IPR000073 -
Lele08g0570 468 Gene3D alpha/beta hydrolase 184 464 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0570 Lele-ChrLele08 3450719 3452314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0570 10 462 Acyl Lipid Metabolism Gene Families AT5G17780 45.077 9.85e-140 406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0570 08 3450719 3452314 Lele08g0570 08 3450719 3452314 ECH
Lele05g0727 05 4288335 4290322 Lele08g0570 08 3450719 3452314 hybridization
Lele06g0564 06 3398081 3399801 Lele08g0570 08 3450719 3452314 hybridization