Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0470 ATGTTGAGGGTTGCGTCGAAGAGGTTTTCCTCTATCTATTCATCTCCATGTAGAGCCGATCAGGCTATGTCCGCTTTCTTTTCTCGAAACCCTATTATATCCGGCGGTACTTCCTCATCCGATCACAACAGATCCTCTCCCGATGCTGGCCGCTTTTCTCCCAGGCCCGACTTCCTTGTTCCATTCAGAGGTTTTGCTACTGACACGCTGATCCATCCAAAAGATAACAGCATTATTCCAGATATTCCTCCTACTGTCGCAGCTATTAAGAACCCTACTTCTAAGATTGTTTATGATGAACACAACCATGAACGATTTCCTCCAGGGGACCCGAGCAAGAGGGCATTTGCCTACTTCGTCCTAACTGGTGGTAGGTTTGTGTACGCTTCTCTAATCCGCCTCCTTATTCTCAAGTTTGTGCTCAGCATGTCAGCTAGTAAGGATGTTCTTGCTCTGGCCTCCCTGGAGGTTGATCTCTCTAGTATTGAGCCTGGCTCTACGGTGACTGTTAAGTGGCGTGGAAAGCCAGTGTTCATCCGTCGCCGAACAGAGGACGATATTAAGCTGGCAAACAGTGTGGATGTTGGATCTCTTCGTGACCCACAGCAGGATGCAGAGAGAGTGAAGGACCCAGAGTGGCTTATTGTGGTTGGTGTTTGCACACATTTGGGTTGCATTCCCCTGCCAAATGCTGGCGACTTTGGTGGATGGTTCTGCCCATGCCATGGTTCGCATTATGACGTTTCTGGCAGAATTAGGAAGGGGCCAGCACCTTACAATCTGGAGGTACCAACTTATACCTTCTTGGAGGAGAACAAATTGATGATCGGTTGA 834 0.4856 MLRVASKRFSSIYSSPCRADQAMSAFFSRNPIISGGTSSSDHNRSSPDAGRFSPRPDFLVPFRGFATDTLIHPKDNSIIPDIPPTVAAIKNPTSKIVYDEHNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQQDAERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEENKLMIG 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0470 277 Pfam Rieske [2Fe-2S] domain 160 263 IPR017941 GO:0051537
Lele08g0470 277 MobiDBLite consensus disorder prediction 36 55 - -
Lele08g0470 277 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 133 277 IPR006317 GO:0008121
Lele08g0470 277 CDD Rieske_cytochrome_bc1 154 277 - -
Lele08g0470 277 Gene3D - 146 277 IPR036922 GO:0051537
Lele08g0470 277 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 84 277 IPR014349 GO:0051537
Lele08g0470 277 Pfam Ubiquinol cytochrome reductase transmembrane region 105 148 IPR004192 GO:0008121
Lele08g0470 277 SUPERFAMILY ISP transmembrane anchor 94 150 - -
Lele08g0470 277 PRINTS Rieske 2Fe-2S subunit signature 215 226 IPR005805 GO:0016020|GO:0051537
Lele08g0470 277 PRINTS Rieske 2Fe-2S subunit signature 249 261 IPR005805 GO:0016020|GO:0051537
Lele08g0470 277 PRINTS Rieske 2Fe-2S subunit signature 237 249 IPR005805 GO:0016020|GO:0051537
Lele08g0470 277 FunFam Cytochrome b-c1 complex subunit Rieske, mitochondrial 147 277 - -
Lele08g0470 277 SUPERFAMILY ISP domain 139 276 IPR036922 GO:0051537
Lele08g0470 277 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 187 275 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0470 Lele-ChrLele08 2879929 2881928 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0470 08 2879929 2881928 Lele08g0470 08 2879929 2881928 ECH
Lele05g0637 05 3749132 3751131 Lele08g0470 08 2879929 2881928 hybridization
Lele06g0457 06 2807983 2810007 Lele08g0470 08 2879929 2881928 hybridization