Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0445 ATGAACTGTTTGTGCTTCATCTGTGGCCAGTATGGAGATCGCATGATATGTGCCCATTGTAGTTCTCAGATATTTATCAAGTCCTTGATTTCCTCTATACCTACAGCGGAGGAAGTGGTGGTTTTAATGTCTCATGTGGATGCCCCTGTTAGTACGTAGAAAATCAGGGTTTGTGTTACATTAGTGATGGGCTTGCCACAGATACCCTTAAGTGCAACTGCAGAAGAAGTTGCACCGGCGGCATCTGTTTTGCATGGCTCTCCACAGTTTTCTGATGCAAGCTCCTCTGATATTGGCAATGTGCATAGTGGAAGTACTAGTGGATTGGCTGCATATCCTTGGGGTTCCCCATTCATTGATTTCCCAAAGAAAGCCTCATTGGAAATTTCAAATACATCTGATAATATGTGTTATTATAGAGGAGCCATCGAGGTGACTTCTAATGTCCACGGCCTAAAGATTGGTTCTTCGGATAGCAGTTGTTTTCATGCTTCAAGAAATGGGCGAAGTATTCACACCCCGGCTTCTAGAATTGTGGGTTTTGAATCTGGCCCAACAAGTTCTTCAACTGATGAGTTCACTGGAGCTCCAGCTACTAATTTTCATTCTTCTGCTGTTACTAATGTCACAGCCAATGATACTGAACCTGCCAGCTCATTGGTCAGGAAGCGACTACTATCACCATTGAGCAGTATGCTCTCTCCAAGCCATTTCAAAGGTGATCCTCTTGACATTGGCTGCAGAAATATGGGGAGTGGCTCCCTTGTTAAGAGTGATAATTTCAAAAATACTGCTGCACAAGATAACAAGAAGGCAAATATTGGAAGTAATAACAGCAGTAACATGCCTTCTTGGTACTTTTCAAGTTGCTTGGAGAAAAGAAACATGCCCCTCAAGACAGATTCCTTTTTTATCAGCGATGGTCCTCTGCTGGAAAATAGAGAACTATTAGCCCATGGCAGTTGTCCTTCCACACCTGCAGTTGACCACTTTAGGGAATCAATGCAAGTAAAATTCCCAAGCGACATGATGCCCACATCCCCAATAGTGAACTCACCTCCACTTTCCTTCTCGCCTCTTGGTCCTAAATTTTCTGAGAGGTTCAATGCAGTCGGAGGATGCAGGAATACTATTATAGAGAAGAAGAATTGCAGTATTACCCTAAAAAATGTAGAAAACTCACTGGACAAATCTAACTTATGCCCTAAGGAAGATAAATTAAATATTGCAAGCAAATCAATTGAAGATGTTGATATTTTGTGCAAAGACTTCTGCCCATCTTCTTTGGATGATAATGCTGATACAAGTTGGCAAATAACTAAAGAATTAGTGCCCACCTCTCACTCCATGAGGTTCAGCAGAAGTTTGAGTGGGCTTCCAATTAGGAGGTCCTTGGTGGGTTCATTTGAGGAGTCTCTTTTATCTGGCCGCTTCTTATCTGGAAACTTAAGTAAGAGAATTGATGGTTTTCTTGCTGTGCTAATTATTACTGGGGGGAACTTCTCACCAAAATCGCAGAAGCTTCCATTTTCAGTGACCAGTGTCGATGAAGATTGCTACCTACTGTATTATGCATCAATAAATCTTGCTGGAAATTCGTCACCAAACAAGGGTAGAGGGCAACAACTGAAACGAGGAATCAGCAATGATGATTCACAAATTGTCAAAAGTCGCTTGCGTATTCCCATGAAAGGACGGATACAATTGGTTTTAAGCAATCCAGAGAAGACTCCCCTTCACACTTTCTTTTGCAATTATGATTTGAGCGACATGCCAGCTGGTACCAAAACATTCTTGCGGCAGAAATTCACCCTTGAATCTTCCAGTTCAACTTCCTCTCAGCCAAAGCAAGGTCTGGCTACTCCAAATGGTGGAATCATGGGTAAGGAGATCCCAGAAAAACGGAAGTATCATGACCAATGTGAAGAATCAATGCACACAGATGCAGTTGACATAGTAAATAAAACAGGATTGATGAATCAGAAAATTGGAAAGGGCTCTAGTTTGGTGGATTTAATTAACGAAGAGGAATTGAAACAATCTCCCAACATGAAAGTGGGAATTCCTTCCTTAGTAAAGCTTGATGATGGCTGTATTTCTGATAAATGCAAGAAGGATAACAGAAAGGAATCGTTCTGGGATAAAACATATGAAGAGTCCAGGAAATCACCGCACTCCTGTTCAAAAGTTAATGAGAATAGTAATAGTGCTGGCCCACTTCGTTATGCTCTTCACCTCCGGTTCACATGTCCTTCACCCAAAAAGACTACAAGAACGTCACTTCAGAAATCCCGACCCAATTCACTTCCAGAAAAAACTGGATTGTATGTGGAAGGGGATCGGAGGTTTTACTTATATAATGATTTGAGGGTTGTGTTCCCTCAGCGGCATTCAGATGCAGATGAGGGCAAGTTGAATGTGGAATACCATTTTCCTGAGAATCCAAGATACTTCGACATCAACTGA 2466 0.4177 MNCLCFICGQYGDRMICAHCSSQIFIKSLISSIPTAEEVVVLMSHVDAPVSTXKIRVCVTLVMGLPQIPLSATAEEVAPAASVLHGSPQFSDASSSDIGNVHSGSTSGLAAYPWGSPFIDFPKKASLEISNTSDNMCYYRGAIEVTSNVHGLKIGSSDSSCFHASRNGRSIHTPASRIVGFESGPTSSSTDEFTGAPATNFHSSAVTNVTANDTEPASSLVRKRLLSPLSSMLSPSHFKGDPLDIGCRNMGSGSLVKSDNFKNTAAQDNKKANIGSNNSSNMPSWYFSSCLEKRNMPLKTDSFFISDGPLLENRELLAHGSCPSTPAVDHFRESMQVKFPSDMMPTSPIVNSPPLSFSPLGPKFSERFNAVGGCRNTIIEKKNCSITLKNVENSLDKSNLCPKEDKLNIASKSIEDVDILCKDFCPSSLDDNADTSWQITKELVPTSHSMRFSRSLSGLPIRRSLVGSFEESLLSGRFLSGNLSKRIDGFLAVLIITGGNFSPKSQKLPFSVTSVDEDCYLLYYASINLAGNSSPNKGRGQQLKRGISNDDSQIVKSRLRIPMKGRIQLVLSNPEKTPLHTFFCNYDLSDMPAGTKTFLRQKFTLESSSSTSSQPKQGLATPNGGIMGKEIPEKRKYHDQCEESMHTDAVDIVNKTGLMNQKIGKGSSLVDLINEEELKQSPNMKVGIPSLVKLDDGCISDKCKKDNRKESFWDKTYEESRKSPHSCSKVNENSNSAGPLRYALHLRFTCPSPKKTTRTSLQKSRPNSLPEKTGLYVEGDRRFYLYNDLRVVFPQRHSDADEGKLNVEYHFPENPRYFDIN 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0445 821 SMART DUF4210_2 465 524 IPR025261 -
Lele08g0445 821 MobiDBLite consensus disorder prediction 605 620 - -
Lele08g0445 821 MobiDBLite consensus disorder prediction 753 769 - -
Lele08g0445 821 PANTHER GH03947P 73 820 - -
Lele08g0445 821 MobiDBLite consensus disorder prediction 605 630 - -
Lele08g0445 821 Pfam Chromosome segregation during meiosis 740 820 IPR033473 -
Lele08g0445 821 MobiDBLite consensus disorder prediction 256 277 - -
Lele08g0445 821 MobiDBLite consensus disorder prediction 180 199 - -
Lele08g0445 821 MobiDBLite consensus disorder prediction 753 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0445 Lele-ChrLele08 2745244 2749242 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0445 08 2745244 2749242 Lele08g0445 08 2745244 2749242 ECH
Lele07g0649 07 3703710 3707462 Lele08g0445 08 2745244 2749242 ECH
Lele05g0618 05 3651337 3656663 Lele08g0445 08 2745244 2749242 hybridization
Lele06g0434 06 2675197 2678796 Lele08g0445 08 2745244 2749242 hybridization