Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0044 ATGGCACCTGATATCACCACCACTGCTGCCAACGCCGCCGCCGCTCAAGCCAAGGCGTCAAGCCGTGCATACGTTACTTTTCTTGCAGGTGATGGTGACTACGTGAAGGGCGTGGTAGGCTTGGCCAAAGGTCTGAGAAAGGCCAAGACCATCTACCCCTTGGTGGTCGCCGTTTTGCCGGACGTTCCAGAGGAGCACCGCAAGATTCTGGTCTCTCAAGGATGCATTGTGAAGGAGATCGAGCCCGTGTACCCGCCCGAGAACCAAACCCAGTTCGCCATGGCCTACTATGTCATCAACTACTCCAAGCTTCGTATTTGGAATTTTGTGGAGTACAGCAAGATGATATACCTGGATGGAGATATTCAAGTATTTGACAACATCGACCACCTTTTTGATCTGCCCAACGACTACTTCTATGCGGTGATGGACTGTTTCTGTGAGAAAACATGGAACCAGTCTCCACAGTACCAGATCGGTTATTGCCAGCAGTGCCCCGACAAGGTGGCTTGGCCCTCTAGTATGGGGCCCAAGCCCGCCCTCTATTTCAACGCTGGGATGTTCGTCTTCGAGCCGAACCTTTCCACTTACAGTGATCTCCTGAAATCCCTCCAAGTCACTGTGCCTACCATATTTGCTGAACAGGATTTCCTGAACATGTACTTTAAGGACAAATACAAGCCCATATCGAACGTGTACAACCTTGTGCTGGCCATGCTGTGGCGTCACCCTGAGAATGTTCAGCTTGACGAAGTCAAAGTGGTTCACTACTGTGCTGCCGGGTCAAAACCATGGAGGTTCACGGGGAAAGAAGTGAACATGGACAGGGAAGACATAAAGATGCTGGTGAACAAGTGGTGGGAGATATACGAGGATGAGACATTGGACTATGAGAACACTGTGGATGTTGAACGTATCAAGGGGGCATTGACTGAGGCTGGTGGTCTTCAGTATGTACCAGCTCCATCAGCCGCATAG 978 0.5082 MAPDITTTAANAAAAQAKASSRAYVTFLAGDGDYVKGVVGLAKGLRKAKTIYPLVVAVLPDVPEEHRKILVSQGCIVKEIEPVYPPENQTQFAMAYYVINYSKLRIWNFVEYSKMIYLDGDIQVFDNIDHLFDLPNDYFYAVMDCFCEKTWNQSPQYQIGYCQQCPDKVAWPSSMGPKPALYFNAGMFVFEPNLSTYSDLLKSLQVTVPTIFAEQDFLNMYFKDKYKPISNVYNLVLAMLWRHPENVQLDEVKVVHYCAAGSKPWRFTGKEVNMDREDIKMLVNKWWEIYEDETLDYENTVDVERIKGALTEAGGLQYVPAPSAA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0044 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 20 299 IPR029044 -
Lele08g0044 325 CDD GT8_Glycogenin 24 292 - -
Lele08g0044 325 PANTHER GLYCOGENIN SUBFAMILY MEMBER 11 292 - -
Lele08g0044 325 SUPERFAMILY Nucleotide-diphospho-sugar transferases 24 297 IPR029044 -
Lele08g0044 325 FunFam Hexosyltransferase 20 298 - -
Lele08g0044 325 Pfam Glycosyl transferase family 8 26 267 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0044 Lele-ChrLele08 292127 293430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0044 1 325 Glycosyltransferase AT1G56600 75.522 0.0 533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0044 08 292127 293430 Lele08g0044 08 292127 293430 ECH
Lele06g0045 06 314520 315873 Lele08g0044 08 292127 293430 hybridization