Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1873 ATGTCGCTCCACGGCGGACCTACCGACCGCCGGGAAGCGGCCTCGCCGGCAGCCGGGAATGCCGTATCTTGTGGTGGCAATGGAGCCCTCACAAACGACTCCAGCAAACCAGTGACGATAGTTTCGAGCCAGAGGCTGCGGTTGAATCCGAACAAGGACCACAAGCCAGATATTTACGAGGGCTTGCAGTTGGAATTCAGTCCTTCGATTTTTAGCTCGCTGGAGCGGTATATGCCTCCTAGCATGCTCAGTCTGCCTCGGGAAGATAAAGTGAACTTCATGCGGGATATTTTGCTCAAGTATCTGCCCCCCGGAGAGCAGAACAGGGCTCAAAAACATAGAGATTACAGACAAAAGATAATATCAAATTATCAGCCTTTACACCGAGAGTTGTACACTTTGAACCCTACAATGTTCTTTGTCCCAGCATTTCTGAAAGCAATCAATGATAATACAGAGCAAAGCTTTAGAAGTATAGTTTCTGAGCCTATTCCGGGCATTTTCTCATTTGAAATGCTCCAGCCTCGCTTCTGTGAGTTATTGTTATCTGAGATTGAAAATTTTGAGAAGTGGGTGAATGAAACAAAATTTCGAATCATGCGCCCTAACACAATGAATAAATATGGTGCTGTACTTGATGATTTTGGCCTTGAAACAATGCTTGACAAGCTTGTGGAAGGCTTTATTCGTCCCATATCTAAAGTCTTCTTTGGAGAAGTTGGTGGATCAACCCTAGATTCTCATCATGGGTTTGTTGTTGAATATGGTAAAGATAGAGATGTTGACTCAGGTTTTCATGTGGATGACTCAGAAGTAACATTGAATGTTTGCTTGGGTAAGGAGTTTTCTGGAGGGGAATTATTTTTTCGGGGGACGAGATGTGATAGGCATGTAAATACAGGGAGTCAGTCAGAGGAGATATTTGACTACTCTCATGTTCCTGGACGAGCTGTGCTTCATCGTGGTCGGCATCGCCATGGTGCTAGAGCTACTACATCTGGTCATCGGATCAACCTACTTCTATGGTGCAGAAGCTCTGTCTTCAGAGAGATGAAAAGGTATCAAAAAGATTTCTCCGGCTTGTGTGGTGAATGCAATCGTGAGAAGAAAGCAAGGCAGTATTCATCAATTACTGCTACAAAATTGGAACTGTTCAAGAGAGGAGAGACCACCACGTAA 1179 0.447 MSLHGGPTDRREAASPAAGNAVSCGGNGALTNDSSKPVTIVSSQRLRLNPNKDHKPDIYEGLQLEFSPSIFSSLERYMPPSMLSLPREDKVNFMRDILLKYLPPGEQNRAQKHRDYRQKIISNYQPLHRELYTLNPTMFFVPAFLKAINDNTEQSFRSIVSEPIPGIFSFEMLQPRFCELLLSEIENFEKWVNETKFRIMRPNTMNKYGAVLDDFGLETMLDKLVEGFIRPISKVFFGEVGGSTLDSHHGFVVEYGKDRDVDSGFHVDDSEVTLNVCLGKEFSGGELFFRGTRCDRHVNTGSQSEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRINLLLWCRSSVFREMKRYQKDFSGLCGECNREKKARQYSSITATKLELFKRGETTT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1873 392 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 246 345 IPR005123 -
Lele07g1873 392 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 34 385 - -
Lele07g1873 392 MobiDBLite consensus disorder prediction 1 36 - -
Lele07g1873 392 SMART p4hc 165 344 IPR006620 GO:0005506|GO:0016705|GO:0031418
Lele07g1873 392 Gene3D q2cbj1_9rhob like domain 170 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1873 Lele-ChrLele07 12027995 12033692 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1873 07 12027995 12033692 Lele07g1873 07 12027995 12033692 ECH
Lele06g1674 06 11297813 11304739 Lele07g1873 07 12027995 12033692 hybridization