Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1620 ATGGAAATGGTGACAAGCTTGATTGCAGACAAGCCAGTGGTGATATTCAGCAAGAGTAGTTGCTGCATGAGCCACACGGTGAAGGCTCTGATATGTAGCTTTGGAGCAAACCCTACAGTGATAGAGGTTGACAAGTTGCCTAATGGGCAACACATAGAGAGAGCTCTCGTGCAGTTAGGTTGCAGACCAAGTGTTCCTGCGGTGTTCATAGGTCAGCAATTCATCGGAGGGGCTAATGAACTCTTCAGCCTCAATATTCAGAACAAGCTTGCCCAGTTGCTTTTAGGTGCTAGAGCCATCTTCATCTGGGCACGCTAG 318 0.4811 MEMVTSLIADKPVVIFSKSSCCMSHTVKALICSFGANPTVIEVDKLPNGQHIERALVQLGCRPSVPAVFIGQQFIGGANELFSLNIQNKLAQLLLGARAIFIWAR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1620 105 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lele07g1620 105 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lele07g1620 105 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lele07g1620 105 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lele07g1620 105 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 101 IPR011905 -
Lele07g1620 105 Gene3D Glutaredoxin 1 102 - -
Lele07g1620 105 Pfam Glutaredoxin 13 75 IPR002109 -
Lele07g1620 105 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Lele07g1620 105 SUPERFAMILY Thioredoxin-like 1 99 IPR036249 -
Lele07g1620 105 CDD GRX_GRXh_1_2_like 12 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1620 Lele-ChrLele07 10021070 10021387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1620 1 102 Miscellaneous Gene Families AT4G15690 51.961 7.81e-36 116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1620 07 10021070 10021387 Lele07g1620 07 10021070 10021387 ECH
Lele05g1563 05 10017207 10017524 Lele07g1620 07 10021070 10021387 hybridization
Lele06g1408 06 9075416 9075757 Lele07g1620 07 10021070 10021387 hybridization