Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1573 ATGTTGTTCTTCTCCTATTTCAAGGACTTGGTGGGCAGAGAGGTAACGGTGGAGCTCAAGAACGATTTGGCTATTCGAGGAACATTGCACTCAGTGGACCAATACCTTAACATCAAGCTTGAGAACACTCGCGTCGTCGATCAAGACAAATACCCTCACATGCTTTCTGTAAGGAACTGCTTCATCAGGGGGTCGGTGGTAAGATATGTGCAGTTGCCTCCGGAAGGAGTGGATGTTGAACTTTTGCATGATGCCACAAGGAGAGAAGCTCGCGGTGGTTGA 282 0.4823 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1573 93 Pfam LSM domain 7 71 IPR001163 -
Lele07g1573 93 SUPERFAMILY Sm-like ribonucleoproteins 3 92 IPR010920 -
Lele07g1573 93 CDD LSm2 2 90 IPR016654 GO:0006397
Lele07g1573 93 PANTHER SNRNP CORE PROTEIN FAMILY MEMBER 1 91 IPR016654 GO:0006397
Lele07g1573 93 SMART Sm3 5 72 IPR001163 -
Lele07g1573 93 FunFam U6 snRNA-associated Sm-like protein LSm2 1 93 - -
Lele07g1573 93 PIRSF Lsm2 1 93 IPR016654 GO:0006397
Lele07g1573 93 Gene3D - 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1573 Lele-ChrLele07 9722221 9725128 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1573 07 9722221 9725128 Lele07g1573 07 9722221 9725128 ECH