Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1108 ATGGCAACTTGTATGTCTACAAATTTTGCGCCTTCGAGAACTATAAATGCAGCAGGGGTGCTAACTGTTAATGGGGGAAGAACATTGACGGAGAACTACCTGGGGAGAAGTTGTTGCACTAAATATGACAGGCATGGATATTCTGGTGGCGACCGAAAGTCAGCGATGATTCAGGTTAAATGTTCGGCCAATTCCCACAATGTCAGCCCATATCATAGCCAGGACCCTTTTCTGAATCGACATCCTGAGGTTTCAATGCTCAAAGGGGAAGGGAACAGCGTGGCGCATAATCCAAGAAAGGATAAGACTGCTGGAAATGTCACCGAGAGCTTAGAAGATGCATCTACTCCAAGTAACTACAATGAAGCCAAGATCAAAGTTATTGGCGTGGGAGGTGGAGGGTCAAATGCAGTCAATCGCATGATGGAGAGTTCCATGAAAGGTGTAGAATTCTGGATAGTTAATACTGATGTTCAAGCCATGAGAATGTCACCTGTCATCCCTAATAACCGTTTGCAGATTGGTCAAGAGCTTACACGGGGTCTTGGTGCTGGTGGCAACCCTGAGATTGGGATGAATGCTGCTAAAGAAAGCAAAGAATCAATAGAAGAGGCAGTTTATGGAGCTGATATGGTCTTTGTTACAGCTGGAATGGGTGGAGGAACCGGCACTGGTGGAGCTCCAATTATTGCTGGTGTGGCAAAGTCGATGGGAATACTGACTGTTGGTATTGTCACAACCCCTTTCTCTTTTGAAGGACGAAGGAGGGCAGTTCAAGCCCAAGAAGGAATTGCAGCACTAAGAGATAATGTTGACACTCTGATAGTCATTCCAAACGACAAGCTACTGACTGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATTTGGCTGATGATATACTTCGACAAGGTGTTCGTGGTATATCTGATATTATTACGATTCCAGGATTGGTAAATGTAGACTTTGCTGATGTTCGAGCAATAATGACCAATGCAGGTTCTTCACTAATGGGGATAGGAACTGCAACTGGGAAGACGAGGGCAAGAGATGCTGCATTAAATGCCATCCAATCACCTTTACTAGATATTGGCATAGAGAGGGCTACTGGCATTGTATGGAACATAACCGGTGGAAGTGATCTGACCTTGTTTGAGGTAAATGCTGCAGCAGAGGTTATATATGACCTTGTGGATCCCACTGCTAATCTAATATTTGGAGCAGTGATAGATCCATCGCTCAGTGGCCAGATAAGCATAACGTTAATAGCAACTGGATTCAAGCGTCAAGAGGAAAATGAAGGAAGGCCCCTACAGGCAAGTCAGCTTACGCAGGGAGATACAACAGGAGGAACCAACCGGCGACCTTCATTCACTGATGGTGGTTCAGTTGAGATTCCTGAATTTTTGAAGAAAAAAGGGCGTTCACTTTTTCCTAGAGCTTAA 1449 0.4472 MATCMSTNFAPSRTINAAGVLTVNGGRTLTENYLGRSCCTKYDRHGYSGGDRKSAMIQVKCSANSHNVSPYHSQDPFLNRHPEVSMLKGEGNSVAHNPRKDKTAGNVTESLEDASTPSNYNEAKIKVIGVGGGGSNAVNRMMESSMKGVEFWIVNTDVQAMRMSPVIPNNRLQIGQELTRGLGAGGNPEIGMNAAKESKESIEEAVYGADMVFVTAGMGGGTGTGGAPIIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMTNAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQISITLIATGFKRQEENEGRPLQASQLTQGDTTGGTNRRPSFTDGGSVEIPEFLKKKGRSLFPRA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1108 482 CDD FtsZ_type1 135 427 IPR000158 GO:0003924|GO:0005525
Lele07g1108 482 MobiDBLite consensus disorder prediction 437 460 - -
Lele07g1108 482 TIGRFAM ftsZ: cell division protein FtsZ 116 440 IPR000158 GO:0003924|GO:0005525
Lele07g1108 482 Pfam FtsZ family, C-terminal domain 335 429 IPR024757 -
Lele07g1108 482 SUPERFAMILY Tubulin nucleotide-binding domain-like 123 321 IPR036525 -
Lele07g1108 482 MobiDBLite consensus disorder prediction 88 116 - -
Lele07g1108 482 PRINTS Cell division protein FtsZ signature 239 260 IPR003008 GO:0005525
Lele07g1108 482 PRINTS Cell division protein FtsZ signature 302 324 IPR003008 GO:0005525
Lele07g1108 482 PRINTS Cell division protein FtsZ signature 325 346 IPR003008 GO:0005525
Lele07g1108 482 PRINTS Cell division protein FtsZ signature 211 231 IPR003008 GO:0005525
Lele07g1108 482 Gene3D Tubulin/FtsZ, GTPase domain 114 333 IPR036525 -
Lele07g1108 482 Gene3D - 334 443 IPR037103 -
Lele07g1108 482 FunFam Cell division protein FtsZ 115 333 - -
Lele07g1108 482 SMART Tubulin_C_4 320 437 IPR018316 -
Lele07g1108 482 SMART Tubulin_4 124 318 IPR003008 GO:0005525
Lele07g1108 482 FunFam Cell division protein ftsZ, putative 334 442 - -
Lele07g1108 482 Pfam Tubulin/FtsZ family, GTPase domain 124 285 IPR003008 GO:0005525
Lele07g1108 482 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 59 440 IPR045061 GO:0003924|GO:0005525
Lele07g1108 482 Hamap Cell division protein FtsZ [ftsZ]. 120 451 IPR000158 GO:0003924|GO:0005525
Lele07g1108 482 MobiDBLite consensus disorder prediction 432 465 - -
Lele07g1108 482 SUPERFAMILY Tubulin C-terminal domain-like 317 431 IPR008280 -
Lele07g1108 482 ProSitePatterns FtsZ protein signature 2. 210 231 IPR020805 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1108 Lele-ChrLele07 6682909 6685904 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1108 07 6682909 6685904 Lele07g1108 07 6682909 6685904 ECH
Lele05g1073 05 6648829 6651834 Lele07g1108 07 6682909 6685904 hybridization
Lele06g0934 06 5762817 5765806 Lele07g1108 07 6682909 6685904 hybridization