Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1059 ATGTCGAAGAAAGTGTGCGATCACCACAAGGATAAGCGAAGGAAGATCTTCCGCCGAATATTCGCGGGGATCCTCATCTTCCTCTTCATAGTCCTCGTCTTGATACTCATAATCTGGGCAATTCTCCGTCCTTCTAAGCCCCTCTTCATCCTTCAAGACGTCACTGTTTACGCCTTCAACGCCTCCGTTCCCAACCTCCTCACCTCCAACTTCCAAGTCACGCTCTCTTCCCGAAATCGCAACGACAAGATAGGAATCTACTACGACCGTCTCGACGCCTACGTCAGCTACCAGAACCAACAAATCACCTACCGTACATCAATCCCGCCCTCGTTTCAGGGTCACGACGAAGTCAACGTCTGGTCGCCATTTGTCTACGGCACAAACGTGCCCGTGGCTCCCTTCAACTTCGTCACCCTGAGTCAGGATCAATCCAATGGCAACGTCCTCGTCATCATCAAAGTTGACGGACGCGTTAGATGGAAAGTCGGGGCCTTCATTTCCGGCCGTTACCATCTCTACGTGAGGTGCCCGGCGTTTATTACATTCGGGGCCAGGAGCAATGGAATTGTCGTCGGAGAGAACGCCGTGAAGTATCAGCTGGTCCAGCGATGCACCGTGAGCGTGTGA 630 0.527 MSKKVCDHHKDKRRKIFRRIFAGILIFLFIVLVLILIIWAILRPSKPLFILQDVTVYAFNASVPNLLTSNFQVTLSSRNRNDKIGIYYDRLDAYVSYQNQQITYRTSIPPSFQGHDEVNVWSPFVYGTNVPVAPFNFVTLSQDQSNGNVLVIIKVDGRVRWKVGAFISGRYHLYVRCPAFITFGARSNGIVVGENAVKYQLVQRCTVSV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1059 209 PANTHER OS05G0367900 PROTEIN 17 196 IPR044839 GO:0098542
Lele07g1059 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1059 Lele-ChrLele07 6396295 6396924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1059 18 177 EF-hand Containing Proteins AT5G21130 22.561 2.13e-06 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1059 07 6396295 6396924 Lele07g1059 07 6396295 6396924 ECH
Lele06g0882 06 5490050 5492503 Lele07g1059 07 6396295 6396924 hybridization