Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1012 ATGGAGGAAAGGGAGGTGGCTGAAGTGAGAATCGTCACTCTTGGGCTTGGTGGTGACGCTTTAGCCAGAGCCTGCGATCACCAGAAAATCAGTTCCTTTTCTGACCCAAACCTGCTCTGCTTCTTCATTTCTTACCACTACTCGCCCCCCTTTCTCTCTTCCCCAATTATTCAGAGAATGCTTCAGTGTCTGTCAAAATCAAAGACCATGTTCCCTGCAAAACCATCTCCTCTGGGTACTTTCGTTCTGTTTCTTATCCTCTGCATTCTGGGCTTTTATACCGTGAATCACCCTCACCTCTTTTCGCCATCTTTCACTTCCCATAATGCGTCTCACTTCCGCCATATTTTCCTTTCCTCTTCCTCTAACTCCACCATCGCCTCCTACCTTCGTGACCTCACCCAGCACCCGCACCTAGCCGGAACAAAACTTGGCTCCGACACCGCCATTTATGTTCTCAACCACTTCAGAGACCTGGGCCTTCAGACCCACACTGTGAACTACAAAGCGCTCCTCTCCTATCCCCTGCACTCCTCCATATCCGCGCATTTTAGCAACGGGTCCTGCTTGGAGTTTCCCTTAGGTGAAATGGTTCGGTCCAAGCAGGTTGACCAGGACGTGGTGCCACCCTACCATGCTTACTCGCCATCTGGTTCGGCGTATGCGAAGGCGGTTTTCGTAAATTATGGGAGGGACGAGGATTACCGTGCACTCGGCGTGCTAGGTATGAACGTTAGCGGATGCATAGTGATAGCGAGGAAAGGTGGCGGTTTGTCCAGAGGCGCGGTGGTGGAGAAGGCGGAGGCGCACGGTGCGGTGGCGGTGCTAATATATGCCGATGTTGATGCGTTTGGTAAAGGGTTCGAGAGGGGACACGTCATGAGAGGCATAGGGGACCCACTAACCCCTGGGTGGGCTGGGGTTGATGGCGGCGAGATCTTGGATTTGGAAGATAGCGAGGTTTTGAAAAGGTTTCCCAAAATTCCATCCATGCCCCTTTCCCCTGAGATCGCTAAGACCATTTTGCACTCGCTAGTAGGCGCTGAGGTGCCCCAGGAATGGAAGAGTTCGCTAGGGTCTAATGTCAGGCTCACGCATGTTGGTCCTGGCCCGACAATGCTCAATTTCACGTACCAGGGGCAAAAGAAGGTGGTTGCAATTGAAAACGTTTTTGCGGTCATAAAGGGATCAGAAGAACCTGATCGTTTTGTGCTGCTTGGGAACCACCGGGATGCCTGGACATATGGTGCTGTAGATCCCAGCAGTGGGACTGCAGCCCTACTCGATATTGCTCGGCGATTTTCTCTTCTATTGCACATCGGGTGGAATCCAAGAAGGACCATAATCCTCTGCAGTTGGGATGCTGAGGAGTTCGGAATGATTGGATCTACTGAGTGGGTGGAGCAGAACCTTGTCAATCTGGGCTCCAAAGCAGTTGCATATCTCAATGTTGACTGTGCGGTCCAAGGGCCTGGTTTCTTTGCCAGCTCTACTCCTCAGCTAGATGATCTCATTCTTGAGGTCACAGAAAAGGTTAAGGATCCTGACGCCAAGGGTGCAACACTATACGAAAATTGGGCAGCTGTTGATGGAAATTCTAATATTTTGAGGCTCAGCGGACTTGATTCCGATTTTGCACCATTTGTGCAGCATGCCGGTGTTCCATCAATTGATTTGTATTATGGAACAGATTTTCCTGTCTATCACACTGCTTTTGACTCCTACAACTGGATGACACAATATGGGGATCCATTCTTTCAGCGCCATGTGGCTGTTGCTGGAGTTTGGGGACTTCTAGCACTTCACCTGGCTGATGATCCCATTCTTCCGTTTAATTACCATTCTTACGTAGACCAGTTACAGGCGTACAGGAACAAACTGAGCAACCTTTTAGACCAATCAATCCCTCTGCAACCATTAACTACCTCGATACAAGACTTTGCATCAGCTGTTGAAGATTTTGATGATGAATTAAATGCACTAAGATTGCAAGAAGCCGCTGATTGTTTTGTGCATTCGAAAAAGCGAGCATTAAATGATAGACTAATGCTTGCTGAAAAAGGCTTCCTGGATCCAAACGGGCTTAGAGAAAGGAACTGGTTCAAGCATCTTGTGTTTGGGCCTCCAAGCGACCATGAAAGTGAGATGGATTTCTTCCCTGGAGTTGCTGATTCGATTGCTTGGTCAGCCAGAAGCAGTGACAAAGAAGGGCAGGCAGCAATTCGACATGAGATCTGGAAGGTTGCCAGAGCCATCAAAAGAGCTGCTTCAGCTCTGAGGGGAGAGTTCATGTAA 2295 0.4932 MEEREVAEVRIVTLGLGGDALARACDHQKISSFSDPNLLCFFISYHYSPPFLSSPIIQRMLQCLSKSKTMFPAKPSPLGTFVLFLILCILGFYTVNHPHLFSPSFTSHNASHFRHIFLSSSSNSTIASYLRDLTQHPHLAGTKLGSDTAIYVLNHFRDLGLQTHTVNYKALLSYPLHSSISAHFSNGSCLEFPLGEMVRSKQVDQDVVPPYHAYSPSGSAYAKAVFVNYGRDEDYRALGVLGMNVSGCIVIARKGGGLSRGAVVEKAEAHGAVAVLIYADVDAFGKGFERGHVMRGIGDPLTPGWAGVDGGEILDLEDSEVLKRFPKIPSMPLSPEIAKTILHSLVGAEVPQEWKSSLGSNVRLTHVGPGPTMLNFTYQGQKKVVAIENVFAVIKGSEEPDRFVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSLLLHIGWNPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLGSKAVAYLNVDCAVQGPGFFASSTPQLDDLILEVTEKVKDPDAKGATLYENWAAVDGNSNILRLSGLDSDFAPFVQHAGVPSIDLYYGTDFPVYHTAFDSYNWMTQYGDPFFQRHVAVAGVWGLLALHLADDPILPFNYHSYVDQLQAYRNKLSNLLDQSIPLQPLTTSIQDFASAVEDFDDELNALRLQEAADCFVHSKKRALNDRLMLAEKGFLDPNGLRERNWFKHLVFGPPSDHESEMDFFPGVADSIAWSARSSDKEGQAAIRHEIWKVARAIKRAASALRGEFM 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1012 764 Pfam Transferrin receptor-like dimerisation domain 637 759 IPR007365 -
Lele07g1012 764 Coils Coil 613 633 - -
Lele07g1012 764 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 78 761 IPR039373 -
Lele07g1012 764 SUPERFAMILY Zn-dependent exopeptidases 121 609 - -
Lele07g1012 764 FunFam Os01g0740650 protein 380 610 - -
Lele07g1012 764 Pfam Peptidase family M28 389 576 IPR007484 -
Lele07g1012 764 SUPERFAMILY Transferrin receptor-like dimerisation domain 610 762 IPR036757 -
Lele07g1012 764 SUPERFAMILY PA domain 171 391 IPR046450 -
Lele07g1012 764 CDD M28_PSMA_like 385 611 - -
Lele07g1012 764 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 611 762 - -
Lele07g1012 764 Gene3D Zn peptidases 124 610 - -
Lele07g1012 764 Gene3D - 178 380 - -
Lele07g1012 764 Pfam PA domain 222 285 IPR003137 -
Lele07g1012 764 Gene3D - 612 764 IPR036757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1012 Lele-ChrLele07 6077982 6083527 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1012 07 6077982 6083527 Lele07g1012 07 6077982 6083527 ECH
Lele05g0974 05 6010181 6010825 Lele07g1012 07 6077982 6083527 hybridization
Lele06g0835 06 5166618 5171751 Lele07g1012 07 6077982 6083527 hybridization