Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0843 ATGAACACGCCTGTGAAGAAAGAGGCTTCTCTTTTGAAGTTACCAGAACCCATACTGGATAACATTCTTGAGAGACTTTCCCCAAATGAACTACGTTGTGCGTCAGAGGTATGCACTTGTTTGATGCGAAGATGCAGAAATAATAGATTGTGGGAGAAACACATACAACGTAAGTGGGGAAGACTACTTGGTGATGTTGCTTATAAAGAGTGGCGGTTTCATACGACGAGGATTATTATAAATAAAGAAAACCCTTTACCGCAAATGAATCCAACGGGATTATTAGGATCCTTCAGTGGTGCTTGGCCTTGTTTATGCCTTTCTTCATATTTGGAAAATCCTAAAGACTTAACTAATTTATTAATGTCAAACTATTCCAATATGGCTTTGTATGTTTCTCTTCAAAGTGGTCGATTTTGGTTCCCTGCTCAAGTGTATAAGATGATCCCGCGGCCTAGGGTATATGAAGCGCTGCTTAGCTATGATCATATTTCAAACACCTTTCAAGCAAGGTGTCCAGCAGGTGAGTGGCTACTGATTGAAAATAATATAACGTGGGACAGGTTAAGATTACCCCCAGTTCACATTTCTCCATGTGCTCTTTATATGTCTAATAATAATGATTTGAAACCCGGTGACCATATTGAGATCCAGAAGAAAAGACGCAACATAGTTTATGATTGGTATTATGGTGTCATTGGTCACTTGGAATCATGTGATGAAGATATGAAGGATCATTGCAGTTGCGAACATAACGAAATGTTGGTGGTGGTGTTGAAATTACAACGTGGAGATCGTTCACGATGGAAATCAAGATTACTAAATAGACAGATGAAGGGGGAACAAAAAGTTAGACTTTGGAGATTTGGAGGAATTAGAAAACTGGAAAGCTTGGAGGATATTCGAAGCTGGAATACAGAATATCATATATTGGTTGATCCATTTGTGGGAGTTTTAACTCTTCTTTCGGCAAGTTCTCTTCGCTTTAATTGCACCAGTCGAGACGATCAAAATGGATCAGTGGGAACTTTTAGTGGTGATTGGCCATGTCTCTCTCTTGGCTCATATCTGGAAGACTCTGAAAAGCTTAGAGGGTGGGATAAGGTGAGAGCCACACCAGTTAAAACTCCTCCAAATGCTCTGCACGTCTCAGATATCAGTAATCTGAAACCTGGGGATCACATTGAGATCCAGTTCAGAACAGCTAGACAAACATTTTATGACTGGCGGTATGCTACTATAGGACACTTGGAAACATGTGACGAGAATGAGAATCATTGTCTGTGTGATCAGAGTGAGGTGGTGGTGGTGGAGTTTAAGCAATACTCAGCAGGATCTCAGATGAGACGCCTAGTGTTCAGCAGAAACAACTACCGGCAGCATGATGATGGAATGGGTCGTTTGTACGGAGGAATTACCAAGATTCAAAGCCAACAACACATTGATACTTGGAAAAGGCTCTTCCCTCAACATAACGTGCCTGACTTTGTTTTATCTATGCCTCCAGTGCCAGCACAGTTTCCGATCCCCTGGGCCTGA 1539 0.4139 MNTPVKKEASLLKLPEPILDNILERLSPNELRCASEVCTCLMRRCRNNRLWEKHIQRKWGRLLGDVAYKEWRFHTTRIIINKENPLPQMNPTGLLGSFSGAWPCLCLSSYLENPKDLTNLLMSNYSNMALYVSLQSGRFWFPAQVYKMIPRPRVYEALLSYDHISNTFQARCPAGEWLLIENNITWDRLRLPPVHISPCALYMSNNNDLKPGDHIEIQKKRRNIVYDWYYGVIGHLESCDEDMKDHCSCEHNEMLVVVLKLQRGDRSRWKSRLLNRQMKGEQKVRLWRFGGIRKLESLEDIRSWNTEYHILVDPFVGVLTLLSASSLRFNCTSRDDQNGSVGTFSGDWPCLSLGSYLEDSEKLRGWDKVRATPVKTPPNALHVSDISNLKPGDHIEIQFRTARQTFYDWRYATIGHLETCDENENHCLCDQSEVVVVEFKQYSAGSQMRRLVFSRNNYRQHDDGMGRLYGGITKIQSQQHIDTWKRLFPQHNVPDFVLSMPPVPAQFPIPWA 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0843 512 PANTHER ESTS AU081301(E20138) 6 306 - -
Lele07g0843 512 SUPERFAMILY F-box domain 7 236 IPR036047 GO:0005515
Lele07g0843 512 Pfam F-box domain 11 53 IPR001810 GO:0005515
Lele07g0843 512 Gene3D - 2 83 - -
Lele07g0843 512 ProSiteProfiles F-box domain profile. 8 54 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0843 Lele-ChrLele07 4867363 4872955 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0803 05 4803610 4808556 Lele07g0843 07 4867363 4872955 hybridization
Lele06g0651 06 3878698 3880361 Lele07g0843 07 4867363 4872955 hybridization