Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0802 ATGCCTTCCTTCCCTCCTCCTGGTTCTGTCACCATCTGCGAAGTCAATCGCGACCTAAGTATTACTCTCTTTCTGTCTCCACTCTCTATGCGCTCTCTCTTCATTCCAGTTACAGCCGAGACCCTCTCGGACGATCGAGCAAAGGACACCTACGGGAAACTTCTTGGATTGGTGTTTAGCCCTGTGCAATTTCAGCCAGAACAGCTCGTATCACCGCCTCCTGATAACGATGCTGAACAAGATGGAGGAACTGCTGGGGATGGGGTCCAAAGGAAAGGTCTATTGGCTATCTTGCAAGGGCTAGTTAATGAGTCCTTTAGACGCCTTTTTCGCCCTAATGATGTGCATTTGCTACCAGAGGTTGGAATTCAAGGAGTAAGCTGGCACCAGAATAAGCATATAATTGCTTTTATCTCTGGGCCAAATCAAGTTATACTTCGTGACTATGAAGATTCAGAAGGGAAGGATCCAATCATTTTGACCAATGAGTACCAGAGAGATGTCAGGGTACTCGAGTGGAGGCCTAATGGTGGGCGGATGCTCTCTGTGGGTTGCAAGGGCGGAATATTCATATGGGCTGCTTCTTATCCGGGGAATGCAGCATCTGTTAGATCTGGGGCAGCTTCCTTTGTAGGAAGTTTATCAAGAGGCACTGGAATTCGGTATATCCTGTCAGATTTTCTTTGCAGTGAGGACAACGGACATATTAGCGCTCTTACATGGACTTCTGCTTCATATGAGAGCTCCTCTTTCACTGTGTGGGACGTTGCTCAAGGTGTGGGGACACCAATTCGGCGGGGATTAGGGGGCATATCAATGCTGAGGTGGTCACCTACTGGAGATTACTTCTTTGCCTCAAAATTTGATGGGACATTTTATCTTTGGGAGACAAACACATGGGCATCTGAACAATGGTCATCAACCAGTGGATTTGTAAAGGGTGCAACATGGGATCCTGATGGGCGTATGATACTGCTTTCTTTTTCTGAATCTTCAACCTTGGGATCTGTTCACTTTGCATCAAAGCCTCCCTCATTAGATGCACATCTGTTACCTGTAGATTTGCCAGAGATAATGTCATTGACGGGCAGTGTTGGCATTGAAAAGATAGCTTGGGATAATTCAGGGGAGCGATTGGCTGTTTCCTTTAAAGATGGAGATGAGGTTTACAGGGGCCTGATCGCCATATATGACACAAGAAGGACTCCTCTGATATCTGCATCACTTATTGGATTTATCAGAGGCCCTGGGGACAATCCAAAGTCAATTGCATTTTCGTTCCATGGAAAATTTAAACAGGGACCATTGCTTTCCGTGTGTTGGAGCAGTGGATTTTGTTGCACATACCCTCTATTATTTCGCTCCCATACGCTTCCATAG 1380 0.4623 MPSFPPPGSVTICEVNRDLSITLFLSPLSMRSLFIPVTAETLSDDRAKDTYGKLLGLVFSPVQFQPEQLVSPPPDNDAEQDGGTAGDGVQRKGLLAILQGLVNESFRRLFRPNDVHLLPEVGIQGVSWHQNKHIIAFISGPNQVILRDYEDSEGKDPIILTNEYQRDVRVLEWRPNGGRMLSVGCKGGIFIWAASYPGNAASVRSGAASFVGSLSRGTGIRYILSDFLCSEDNGHISALTWTSASYESSSFTVWDVAQGVGTPIRRGLGGISMLRWSPTGDYFFASKFDGTFYLWETNTWASEQWSSTSGFVKGATWDPDGRMILLSFSESSTLGSVHFASKPPSLDAHLLPVDLPEIMSLTGSVGIEKIAWDNSGERLAVSFKDGDEVYRGLIAIYDTRRTPLISASLIGFIRGPGDNPKSIAFSFHGKFKQGPLLSVCWSSGFCCTYPLLFRSHTLP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0802 459 SUPERFAMILY WD40 repeat-like 121 448 IPR036322 GO:0005515
Lele07g0802 459 SMART WD40_4 257 296 IPR001680 GO:0005515
Lele07g0802 459 SMART WD40_4 354 398 IPR001680 GO:0005515
Lele07g0802 459 SMART WD40_4 153 193 IPR001680 GO:0005515
Lele07g0802 459 Gene3D - 113 449 IPR015943 GO:0005515
Lele07g0802 459 FunFam Aladin isoform A 228 448 - -
Lele07g0802 459 PANTHER ALADIN/ADRACALIN/AAAS 3 456 IPR045139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0802 Lele-ChrLele07 4594085 4598527 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0769 05 4518414 4523218 Lele07g0802 07 4594085 4598527 hybridization
Lele06g0605 06 3619443 3623799 Lele07g0802 07 4594085 4598527 hybridization