Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0603 ATGAACCTCTTCCTTGTCTCAACTCGCCCCTCCTTTCCCCTCTTCACCTGCCACGCCACCGCTGTGTTGGCCACCCACCCTTCGCCGCCTCCTCCTCCTCCTTTAACCTTGCCGTTAAGCCCTACTACATCCGTACACCCTTCTCTAACCTGTGCTCTTCAGTGCCCACATTTTCAATCTTGCTCAGGGTGCACGCACGAGCTCAATCTCCACCATCCCATTATTGTCGACGAAGCCACCAATTTCTTTAAAAAATATGGAGTTTCGGATTTCACATTTGATAGTTGTAAATTGTGGGGGTGGAGATGCCGTGCAAAACTGGCTGTGCGCGGTTCATCAACGGACCCTCTCATCGGACTTTATGAGGAGGGTACTCATAACGTAGTTGACATTCCGGATTGCAAAGCTCATCATCCTAATATTAATGCTGCTGTGGACCTGCTTAAACGAGGTATTGCTGAGGTTGACGTTCAGCCATATGATGAAGATGAGGGCACTGGTGATTTACGATACGTTCAGATGGCCGTTACAACTTACAACACATCTCTTCCTGCCGCAGAAAGATATAAGAATGGAAAAGTACAGGTCACTTTAGTTTGGAATTCAAGAAACGAAAATTCATCCAAGTCGGACAAACTGAATGCATTGGCAAATTTTATATGGAGAAATGGTGGGCCAAGGAGCAGTTTCCATGTAATTCACTCTGTGTGGGCCAATTTCCAGACTTCCACAAACAATATCATTTTTGGGAATAGATGGAGACATCTTCTTGGAGAAAGAGATTTTTGGGAACATGTTGGTGGCATTGATGTGTCCTTGGCTCCTTCCAGTTTTGGTCAGGCAAACACACGGGCTTTCAATATCTTGCTTAAGAAGTTACAGAAGTATGTTCCATATGGAGCATCTGTTGCAGATTTGTATGCTGGAGCTGGGGTCATTGGCTTGTCATTAGCGGCTACAAGAAAGTGCAGATCTGTAAAATGCATTGAGATTAACAAAGAGTCGAAACTGTCTTTCGAGAAGACGGTTGATCGCTTGCCTGCAACCATTGAGAGTAGCATCACTTGGCATCATGCTGATGCTTCAAAAGAACCTCTTTCTTGGCTTGTGGGCTCAGATGTTGTTGTCATCGATCCTCCTAGAAAAGGACTAGACCAATCTCTTGTTGATACATTGCAAAATATATCATCAGTAGAGCGTAGAGTATTGTCATCATCCGGAAGCTCGAGCTCAAGAGTCAAAGAAGAGAAAAGACCTTGGGTTTTGCGTGCTAAGGAAGATTCAGTCCAGGTTGGAAGCAAAACCCCTCAGGATAACAACACACAATCGCTGCCACAAACCCTAATATATATAAGTTGTGGATGGGAAAGCTTCAAAGAGGACTGCAAGGCATTATTGTCTAGTAAGGCATGGCACTTGGAGAAAGCCCATGGTTTTAATTTTTTCCCTGGCACCCAAAGCATTGAAGTTTTAGCAGTATTCAAGAGGGGTCATCGGAAAGCGAAATCAGGAAAAAAGAAGAAGAAGCGATTTAGCAATCTGGAAGGGGAAAAGACTGTCATAAGCGTTTCCTTTGTCTTGTGTCAGTGCAGGATGAGAGATTTGGGACTCAGAAAATGGCAGTCTCTCTCTCTTACTGCTGCTTTCTTCATCGTCCTCCTTTGCTTCCTTCTGTTTCACTCTTCTGAATTTGTTCGGAGTGGTAATCGAAGAAGGATTTTGCTCAAGCCTCCAACTTCCCACTCAGAAAGAGAAAAACTGGATCAAGTTCTGTTAAGAGCGACCATGCCTGACAGATCAGTGATACTCACAATGCTAGATGAAGCATGGGCAAGCCCTGGATCTATCATTGACGTATTCCTGCGAAGTTTCAAAGTTGGAGAAGGGACAGAGAAATTCTTGAATCACCTGGTTATCATACCCATGGACGCAAAAGCATTTAACTACTGCAGATCCTTGCATCCCTATTGCTTCTACCCATCCATCTTTTCTCGCTATCTTCGCCTCACTGCAAAATCCACACGAAGCCCAGATCATAATATGTTCATTTGGAAAAGAAACTACATTCTGCTCCAAGTTCTTGAACTGGGTTACAACATAATCTTCACGGATGCAGATGTAATGTGGCTCAGAAGTCCACTTTCACACTTCCATCCCCAAAATGAACTCACGATTTCATGTGATTTCTCAAGTTATGAGAAAAGCGGAGGTAACGTGCAAGATGGGGGACTTTTCTTCCTGAAATCAACTGCGATATCAATTGAATTCTTCAAGTACATGAATTTCATGAAGGTTCTATATCCAAACTCGCGAGTCAACAAGTCCCTCTGTTCGTATATTGTGCAGAGTCAAGACGTAGTTGCAGCGTATGGCTTTCGCATTCATTATGTGAATACAACTTATTTCGGTGAATTCTGCCACCGTAACAAGAATCAGTTTAGGGAGGTTTATAGCATGCATGCCAATTGTTGTGAAGATCTTAGAAGCAAAGTTCATGACCTGAAGCTTGCTCTCCATGATTGGATCCACTTCAGAGCACGTTCATCAGGTAATTCTACTTCGAAGCCTACGTCTTTCAGGTGGAGAGCTCCACATAAGTGTCTGATATCATGA 2613 0.4374 MNLFLVSTRPSFPLFTCHATAVLATHPSPPPPPPLTLPLSPTTSVHPSLTCALQCPHFQSCSGCTHELNLHHPIIVDEATNFFKKYGVSDFTFDSCKLWGWRCRAKLAVRGSSTDPLIGLYEEGTHNVVDIPDCKAHHPNINAAVDLLKRGIAEVDVQPYDEDEGTGDLRYVQMAVTTYNTSLPAAERYKNGKVQVTLVWNSRNENSSKSDKLNALANFIWRNGGPRSSFHVIHSVWANFQTSTNNIIFGNRWRHLLGERDFWEHVGGIDVSLAPSSFGQANTRAFNILLKKLQKYVPYGASVADLYAGAGVIGLSLAATRKCRSVKCIEINKESKLSFEKTVDRLPATIESSITWHHADASKEPLSWLVGSDVVVIDPPRKGLDQSLVDTLQNISSVERRVLSSSGSSSSRVKEEKRPWVLRAKEDSVQVGSKTPQDNNTQSLPQTLIYISCGWESFKEDCKALLSSKAWHLEKAHGFNFFPGTQSIEVLAVFKRGHRKAKSGKKKKKRFSNLEGEKTVISVSFVLCQCRMRDLGLRKWQSLSLTAAFFIVLLCFLLFHSSEFVRSGNRRRILLKPPTSHSEREKLDQVLLRATMPDRSVILTMLDEAWASPGSIIDVFLRSFKVGEGTEKFLNHLVIIPMDAKAFNYCRSLHPYCFYPSIFSRYLRLTAKSTRSPDHNMFIWKRNYILLQVLELGYNIIFTDADVMWLRSPLSHFHPQNELTISCDFSSYEKSGGNVQDGGLFFLKSTAISIEFFKYMNFMKVLYPNSRVNKSLCSYIVQSQDVVAAYGFRIHYVNTTYFGEFCHRNKNQFREVYSMHANCCEDLRSKVHDLKLALHDWIHFRARSSGNSTSKPTSFRWRAPHKCLIS 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0603 870 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 59 497 IPR010280 GO:0006396|GO:0008173
Lele07g0603 870 Gene3D - 102 278 - -
Lele07g0603 870 PANTHER BNAA06G32370D PROTEIN 44 500 - -
Lele07g0603 870 Pfam Nucleotide-diphospho-sugar transferase 633 834 IPR005069 -
Lele07g0603 870 Gene3D Vaccinia Virus protein VP39 432 494 IPR029063 -
Lele07g0603 870 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 54 396 IPR029063 -
Lele07g0603 870 Pfam Methyltransferase small domain 287 408 IPR007848 GO:0008168
Lele07g0603 870 CDD AdoMet_MTases 303 403 - -
Lele07g0603 870 Gene3D Vaccinia Virus protein VP39 279 431 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0603 Lele-ChrLele07 3436095 3444655 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0576 05 3382015 3383721 Lele07g0603 07 3436095 3444655 hybridization