Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0401 ATGTCTATTACCGCCGTTCTCTTTGTCTCTACGCTCCTTCTTCTATCTCCTTTGCCTTCTTCATCGACCGCCACCGGTGATGGGGTCCGTACCGCCTACGAAGTCCTCGGCGACTATCACTTTCCTGAGGGTATTCTCCCAAAAGGAGTTGTTGGTTACGAATTAGACAGATCTACCGGTAAATTCCGCGCCTACTTGAACGGTTCCTGCAGTTTCTCTCTCGAGGGATCGTACCAGCTTAGCTATACATCTACCATCAGTGGTTACATTTCCAAAGACAGGCTCACGAAACTCTCTGGGGTTAGCGTGAAAATACTGTTGTTCTGGGTCAGTATCGTGGAGGTAACTCGGAATGGTGACGAGCTTGGCTTCTCGGTCGGGATCGCCTCCGCCTCTTTCCCGTTAGACAACTTCTTCGTATGCCCACAGTGTGGATGTGGATTGAATTGTGATAATCTGCAAGCAAGAAAGCTGAAGTTGAACCCTTCTGCTTCCTCCATGTAG 504 0.494 MSITAVLFVSTLLLLSPLPSSSTATGDGVRTAYEVLGDYHFPEGILPKGVVGYELDRSTGKFRAYLNGSCSFSLEGSYQLSYTSTISGYISKDRLTKLSGVSVKILLFWVSIVEVTRNGDELGFSVGIASASFPLDNFFVCPQCGCGLNCDNLQARKLKLNPSASSM 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0401 167 PANTHER T31J12.3 PROTEIN-RELATED 16 145 IPR007493 -
Lele07g0401 167 SUPERFAMILY At5g01610-like 7 150 IPR036758 -
Lele07g0401 167 Gene3D - 21 145 IPR036758 -
Lele07g0401 167 Pfam Protein of unknown function, DUF538 32 138 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0401 Lele-ChrLele07 2264254 2264757 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0401 07 2264254 2264757 Lele07g0401 07 2264254 2264757 ECH
Lele07g0401 07 2264254 2264757 Lele08g0210 08 1267850 1268353 ECH
Lele05g0383 05 2190931 2192352 Lele07g0401 07 2264254 2264757 hybridization
Lele06g0203 06 1238444 1240060 Lele07g0401 07 2264254 2264757 hybridization