Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0248 ATGTTAAGGTTGCCAGAAGATCCATTTTACAAGCAAATGGCTGCTGAGTTTTCTAAATACCAGATCTGTGCCAATGTGTATGCATTTAGTGACAAGTACACAGACATTGCAGCCTTAGGAACTTTGGCAAAGTATACTGCCGGTCAAGTATATTACTATCCAGCTTTCCAATCAACCATTCATGGGGAGAAGTTGAGGCATGAGTTAAGGAGAGACCTAACCAGAGAAACTGCCTGGGAAGCTGTACTGCGCATTAGATGTGGAAAAGGTGTTCGCTTCACAACTTTTCACGGGAACTTCATGCTAAGATCTACCGATCTGTTAGCACTTCCAGCTGTAGATTGTGATAAAGCTTTTGCCATGCAGTTATCTCTTGAAGAGACGTTGCTCACAACTCAGACTATGTATTTCCAAGTTGCATTACTATATACTGCATCTTGTGGGGAAAGACGGATCAGAGTACACACTGCTGCGGCTCCAGTAGTTACAGACTTGGGAGAGATGTATCGCCTGGCTGATACTGGTGCCGTAGTTTCTCTACTTAGTAGGCTAGTAATTGAGAAAACATTGTCTAATAAACTGGAAGATGCAAGGAGTGCTGTACAGCTAAGAATTGTCAAGGCCCTCAGAGAATATCGAAATCTATATGCTGTGCAACATCGCTTGGCTAACAGGATGATATATCCCGAGTCTCTAAAATTCCTACCATTGTATGGCTTAGCACTTTGTAAATCAATACCTCTCCGTGGAGGGCATGCTGACGCTCCACTGGATGAACGGTGTGCGGCAGGATACACAATGATGGCTCTACCGATAAAAAGGTTGTTGAAATTTCTATATCCAAGCTTGATTCGACTTGATGAATATCTGTTCAAGTCTGATGAATTAAAAAACATTGAGAAAAGGTTACCATTGACTGGTGAGAGCATGGATTCTAGAGGCCTTTATGTATTCGATGATGGCTTCCGGTTCACTATATGGTTTGGTAGAGTGCTTTTACCTGATATAGCTATGAATTTGCTCGGGGAAGACTTCGCTGCAGAATTATCAAGGGTTACTCTTAAGGAGCATGATAATGAGATGTCAAGGAAGCTAATCAGGATACTTGAGAAACTGAGAAATACTGATCATTCTTATTATCAGTTGTGCTATCTTGTGAGGCGAGGCGAACAGCCCAGAGAAGGAATCCTTATCCTTGCAAATCTTGTTGAGGATCAGATGGGTGCCGGTCCCAAGCCCGGGTCGTTGCCCGCGAGAGAGGCAGGGATGATTGTGTGGCAATTTTTACTATTATTGCGCATCTCCTTGGATCCCCTTCTCTCTCCTGAGAGAAGGCATCATAGAGCAGGATCTTTGTCAGCGTTCTGTCTGTCTTTTCAGCGAGGTCGCAGCCATTTTTCCCGTCGGTAG 1410 0.4376 MLRLPEDPFYKQMAAEFSKYQICANVYAFSDKYTDIAALGTLAKYTAGQVYYYPAFQSTIHGEKLRHELRRDLTRETAWEAVLRIRCGKGVRFTTFHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTMYFQVALLYTASCGERRIRVHTAAAPVVTDLGEMYRLADTGAVVSLLSRLVIEKTLSNKLEDARSAVQLRIVKALREYRNLYAVQHRLANRMIYPESLKFLPLYGLALCKSIPLRGGHADAPLDERCAAGYTMMALPIKRLLKFLYPSLIRLDEYLFKSDELKNIEKRLPLTGESMDSRGLYVFDDGFRFTIWFGRVLLPDIAMNLLGEDFAAELSRVTLKEHDNEMSRKLIRILEKLRNTDHSYYQLCYLVRRGEQPREGILILANLVEDQMGAGPKPGSLPAREAGMIVWQFLLLLRISLDPLLSPERRHHRAGSLSAFCLSFQRGRSHFSRR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0248 469 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 290 409 IPR036180 -
Lele07g0248 469 Pfam Sec23/Sec24 helical domain 173 276 IPR006900 GO:0006886|GO:0006888|GO:0030127
Lele07g0248 469 SUPERFAMILY vWA-like 5 71 IPR036465 -
Lele07g0248 469 SUPERFAMILY Helical domain of Sec23/24 173 280 IPR036175 GO:0006886|GO:0006888|GO:0030127
Lele07g0248 469 Pfam Sec23/Sec24 beta-sandwich domain 78 161 IPR012990 -
Lele07g0248 469 PANTHER SEC24-RELATED PROTEIN 2 410 - -
Lele07g0248 469 Gene3D Sec23/Sec24 helical domain 158 300 - -
Lele07g0248 469 Pfam Sec23/Sec24 trunk domain 6 72 IPR006896 GO:0006886|GO:0006888|GO:0030127
Lele07g0248 469 Gene3D - 49 157 - -
Lele07g0248 469 SUPERFAMILY beta-sandwich domain of Sec23/24 76 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0248 Lele-ChrLele07 1347702 1355029 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0237 05 1317907 1324680 Lele07g0248 07 1347702 1355029 hybridization
Lele06g0053 06 351124 357558 Lele07g0248 07 1347702 1355029 hybridization