Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2741 ATGGCCAACAACGACGACGACACAGAAATCGAATACCAAGAGGATTATGTACAGAACTCTCGTGGAATGAAGCTGATGACTTGTAAATGGGTTTCTGCGAAGGAAACATCGAAAGCTCTGATATTCTTGTGCCATGGCTACGCAATGGAATGCACCGTCACGATGAACAGCGCAGGAAGAAGGCTGGCTCAGGCGGGCTTTGAAGTGTATGGAATAGATTATGAAGGGCATGGGAAATCAGAAGGGTTGGCTGGTCTTGTGAGTAATTTCGATGACGTTATCGATGATTGCTCTAACTATTTCTCCTCCATTTCCGAGAAGGAAGAGAATAAGAAGAAGATGAGGTACCTGGTAGGGGAATCCATGGGAGGAGCTGTGGCTCTCTTATTGCACAGAAAGAAGCCTCATTTCTGGGATGGTGCCATTTTGGTTGCTCCAATGTGCAAGATAGTGGATGAAATGAAACCGAGCCCACTGGTGATCCACATGTTGACGGCACTAAGCAAGATCATTCCGACTTGGAAATTAATACCAACTAAGGATATTATTGCCATTGCCTTCAAGGAACCCCAGATTAGAGAACAGATCAGGAACAACCCGTTGTGCTATAAAGGACGGCCAAGATTGAAAACCGGCCACGAACTTTACAGAGTCAGCATACGGCTGGAGCAAACACTAGACGAGGTTTCACTACCGTTCTTGGTTCTACACGGTGAAGATGACAGAGTGACAGATAAATCAGTGAGCATTCAGCTGCATAAGGTGGCTTCAAGCAAAGATAAGACAATAAAGTTGTACCCAGGAATGTGGCATGCTCTTCTCATCGGAGAGCCGCCGGAGAACTTGGACATCGTTTACAAGGACATCGTCGACTGGCTTGATGACAAGTGCAAGTATGGAAATGCCAGATTAGAGAGAGAGCTTAAAAACCAAAACGAGCTGAATAGCAATGGGGGCTTCATAGTGGGACGAGTTGTCAGATTTCCGAATCACTCCGTGGATGGGAACGGCTCCAAATCCATAGAAATAAGGTTTTTAATGAAGTTAAACAATGAAACTGTATCAATCGAGCTGAAGAATGGGACCGTTGTTCATGGCACCATTACAGGTGTGGATATCAGCATGAATACACATTTGAAAACGGTTAAGCTTACTCTGAAAGGGAAAAATCCAGTGACTCTGGATCATCTTAGTGTGAGGGGTAACAACATCCGTTATTATATCCTTCCTGACAGTTTAAATCTCGAGACTTTGCTGGTCGAAGAAACACCTAGGGTGAAGCCTAAGAAGCCTACTGCAGGAAAGCCATTGGGTCGGGGCAGAGGTAGGGGCCGTGGACGTGGACGTGGTCGGGGCCGTTAA 1362 0.4589 MANNDDDTEIEYQEDYVQNSRGMKLMTCKWVSAKETSKALIFLCHGYAMECTVTMNSAGRRLAQAGFEVYGIDYEGHGKSEGLAGLVSNFDDVIDDCSNYFSSISEKEENKKKMRYLVGESMGGAVALLLHRKKPHFWDGAILVAPMCKIVDEMKPSPLVIHMLTALSKIIPTWKLIPTKDIIAIAFKEPQIREQIRNNPLCYKGRPRLKTGHELYRVSIRLEQTLDEVSLPFLVLHGEDDRVTDKSVSIQLHKVASSKDKTIKLYPGMWHALLIGEPPENLDIVYKDIVDWLDDKCKYGNARLERELKNQNELNSNGGFIVGRVVRFPNHSVDGNGSKSIEIRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2741 453 SUPERFAMILY Sm-like ribonucleoproteins 344 452 IPR010920 -
Lele06g2741 453 Gene3D - 337 424 - -
Lele06g2741 453 MobiDBLite consensus disorder prediction 424 453 - -
Lele06g2741 453 Pfam LSM domain 344 408 IPR001163 -
Lele06g2741 453 PRINTS Alpha/beta hydrolase fold signature 66 81 IPR000073 -
Lele06g2741 453 PRINTS Alpha/beta hydrolase fold signature 233 247 IPR000073 -
Lele06g2741 453 PRINTS Alpha/beta hydrolase fold signature 117 130 IPR000073 -
Lele06g2741 453 MobiDBLite consensus disorder prediction 432 453 - -
Lele06g2741 453 CDD Sm_D1 343 432 IPR034102 GO:0000387
Lele06g2741 453 FunFam Small nuclear ribonucleoprotein Sm D1 340 421 - -
Lele06g2741 453 SMART Sm3 344 409 IPR001163 -
Lele06g2741 453 FunFam Alpha/beta-Hydrolases superfamily protein 7 300 - -
Lele06g2741 453 Pfam Serine aminopeptidase, S33 37 277 IPR022742 -
Lele06g2741 453 PANTHER PHOSPHOLIPASE-RELATED 16 295 - -
Lele06g2741 453 Gene3D alpha/beta hydrolase 4 300 IPR029058 -
Lele06g2741 453 SUPERFAMILY alpha/beta-Hydrolases 10 296 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2741 Lele-ChrLele06 35211234 35220951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2741 10 313 Acyl Lipid Metabolism Gene Families AT2G39420 67.105 4.42e-160 453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2741 06 35211234 35220951 Lele06g2741 06 35211234 35220951 ECH
Lele06g2741 06 35211234 35220951 Lele07g2776 07 33247537 33253006 hybridization
Lele06g2741 06 35211234 35220951 Lele08g2684 08 32424695 32433618 hybridization