Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1215 ATGGCGATGGCTGGGTTGTACAGGCGGTTACTTCCTTCTCCGCCTGCAGTAGAATTCGCTTCATCTGAAGGAAAGCAACTTTTTCTTGAAGCCATTCAAAATGGAACAATGGAAGGATTTTTTAGATTAGTTTCTTATTTTCAAACACAATCAGAGCCTGCATACTGCGGATTGGCAAGCTTATCCATGGTCTTGAATGCTCTTGCTATCGATCCTGGAAGAAAATGGAAAGGTCCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAACCTCTAGAAAAGGTCAAAGCCAGAGGTATCTCATTTGGGAAGCTTGTATGCTTGGCTCATTGTGCTGGAGCAAAAGTTGAAGCCTTTCGTGCAAATCAAAGCAACATTCATGACTTCCGTAAATATGTCATGAGGTGTTCAACTTCTGATGATTGTCATATAATCTCTTCATACCACAGAGCTGCTCTCAAACAAACGGGAACTGGCCATTTTTCTCCTATTGGTGGCTATCATGCTGGAAAGGACATGGCACTTGTTTTGGATGTTGCACGTTTCAAGTATCCTCCTCATTGGGTCCCACTTGCCCTTCTTTGGGAGGGCATGACCCATGTAGTCGAAGACACTGGACAACCTAGGGGGTTCATGCTTATATCAAGGCTTCACAGGGACCCTGGTATGCTTTATACTCTGAGCTGCAAGCATGAGAGTTGGATTGGCATTGCAAAATTCCTGATGGATGATGTTCCCCTTCTACTAAAATCAGAGGACGTGAAGAACGTTGACAAAGTTCTCTCAGTTGTAGTCAATTCGCTTCCATCTAATTTTGGGGATTTTATTAAGTGGGTTGCAGAAGTAAGGAGGCGAGAGGATGGTGGTCCAAGTTTGAGTGCAGAGGAGAAAGCTAGGGTTTCTATTAAGACACAAGTATTGAAACAGGTGCAGGAGACTCGGCTTTTTAAACATGTCACTTCTTTTGTATCAAATTCTTGTTGTAGGCTGCCATCTATTTCAGGTCCTGGAGACACCTTACCTGACATTGCAGCAAGTGTTTGTTGCCAAGGAGCAGAAATTCTAGGCGGGAAGCTCAGCCCATCGGCAGTGTATTGCTGTAGAGAAACATGTATGCAATGCTTGAAAGCAGAGGGTGACAAGCCAGTCACAATGGTCTGTGGGACCGTAGTAAATGGTAACAGTGAACAAGGGGTTGATGTTTTAATTCCTTCTCCTCAGGCATCATCTTGTGATTGCTCTAGCCCAAGTAAGTACACTGAGATGCACCCAGCTAGCAATGACGTACTAACAGCACTGCTACTCTCGTTACCATCTACAACCTGGGTTGGTATCAAAGATGGGCAAGTCTTGAAGGAAATACATGAACTTGTTTCAATGGATAACCTTCCTACTTTGCTTCAAGAGGAGGTTTTGTACCTAAGACGTCAACTTCACATGCTAAAGAGGTGTCAAGAGAACAAGGTGGATGAAGATCTTGGTGCACCTCTCTCGTAG 1503 0.4405 MAMAGLYRRLLPSPPAVEFASSEGKQLFLEAIQNGTMEGFFRLVSYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKARGISFGKLVCLAHCAGAKVEAFRANQSNIHDFRKYVMRCSTSDDCHIISSYHRAALKQTGTGHFSPIGGYHAGKDMALVLDVARFKYPPHWVPLALLWEGMTHVVEDTGQPRGFMLISRLHRDPGMLYTLSCKHESWIGIAKFLMDDVPLLLKSEDVKNVDKVLSVVVNSLPSNFGDFIKWVAEVRRREDGGPSLSAEEKARVSIKTQVLKQVQETRLFKHVTSFVSNSCCRLPSISGPGDTLPDIAASVCCQGAEILGGKLSPSAVYCCRETCMQCLKAEGDKPVTMVCGTVVNGNSEQGVDVLIPSPQASSCDCSSPSKYTEMHPASNDVLTALLLSLPSTTWVGIKDGQVLKEIHELVSMDNLPTLLQEEVLYLRRQLHMLKRCQENKVDEDLGAPLS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1215 500 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 479 IPR040409 GO:0016756|GO:0046872|GO:0046938
Lele06g1215 500 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 15 220 - -
Lele06g1215 500 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Lele06g1215 500 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lele06g1215 500 Pfam Domain of unknown function (DUF1984) 231 480 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lele06g1215 500 Gene3D - 16 221 IPR038156 -
Lele06g1215 500 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1215 Lele-ChrLele06 7645433 7650017 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1215 06 7645433 7650017 Lele07g1414 07 8577843 8582159 hybridization
Lele06g1215 06 7645433 7650017 Lele08g1213 08 7641755 7645932 hybridization