Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1213 ATGATTGAGAGTAGTCACCCTCTGTTGAGTGGAGAGAGACAGGAAAGAGGTTATGGCCATGCCTTATCTTCAAGCCAGATGCAAGTTCTGGCTTCTATCTGTGAGGCATTTCTACCTCCTATTACTGAGGACCATGGCGATTCCTCTCAATCCTTCTACACATCCGGTTCCCAAGCTCCTCTTCCCGATGAGGCGGCAGAGCTGTTACGCAAGAGGATTCAGCCGGAGGCTCAGTTCGTTGTGAGCTCTGTTCTGCGGATTTTGTCGTTTAGACTCGGAACGCTGTTGCTTTGCGGAAGAATTGCGTTGGACCGGAAGTGGCCCTTCGTTCACAAGTTATCGGAATTATCGCTGGACAAGAGGGAACAGATTCTGCAGAGCTGGTCCAGGGAAAAGCGTCTCGTTCCTCTGCGGATTGCGTTCTTGATCATCAAAATCACCTTCTTTTATAATTTATTCTCAAGGGTAACGCTTCTCACTATTCTTAAAAGTCAAAACCTTCAATCCAACCTTACAGTAGTCTTGTTCATAAACACCGCTCCTCGTGCCATAGATCAAAATGGGAATAACCCCACATGGGAAGCTATTAAGTACAAAGTGGACAAAAGGGAAAAGCTGAAGCTAAAGAAGAGGCCTCTTGAGAAAGGAGTAATTGAGACTAGGCTCGAAAACGATACCACTATTTTGCAGTCCCTCGCAGAAAAAGGCCTTCAAGTCAGTGAAAATGCAGAGAACAACACGTACAAGATCAAATGTGATGTTGTGGTTGTTGGTTCTGGCTCTGGGGGAGGAGTTGCGGCAGCAGTTCTTGCAAGCTCAGGCCTGAAAGTGGTCGTTCTAGAGAAAGGAAATTACTTTGTTCCTAAAGATTACTCTTCCTTGGAAGGCCCTTCTTTCAATGAGCTATATGAATCAGGTGGGATCTTGTCAACCCTTGATGGAAAAATGATGGTCATGGCTGGCTCAACTGTGGGAGGAGGCTCTGCCGTAAACTGGTCCGCGTCTGTCAAAACACCTAATTCTGTTCTCAAGGAATGGTCACAATGCTACAAAATCCCACTCTTTGGAAGTTCCACATACCAATCTGCTATGGAAGCAGTCTGGAGGAGGATTGTGATCATAACTGGATGTAAAGCTGAGCAGTTCATATTGGAAGATAGGAACAACGGAATAAGGACAAAAAAATGCCTCGGAGTGATTGCAACGACACTGAAGAGCAAAGTGTCAAGGAAACTCCAAATCGAATCAAAGAGAATGAAGTGTAAAGGGGTGAGGGAGGAGGATGTGGAGGAGTTTTTAGACAAAGTGATAGTGGTGGGGGGACCAAGATCAAGGGATGAACTGTGGACGATGTATGCTACTGCTCATCAAATGGGAAGCTGTAGAATGGCTCCTACTCAAGAACAAGGTGCTCTTGATTTGAATGGCCAGAGTTGGGAAGCAAAAGACCTGTATGTTTGTGATGGCAGCGTTTTGCCCAGTGCTATTGGGGTCAATCCAATGATAACCATCCAATCCACAGCCTATTGTATCGCCAATAACATTGCAGAGTCCTTCAAAAAGGATAAGTAG 1572 0.4561 MIESSHPLLSGERQERGYGHALSSSQMQVLASICEAFLPPITEDHGDSSQSFYTSGSQAPLPDEAAELLRKRIQPEAQFVVSSVLRILSFRLGTLLLCGRIALDRKWPFVHKLSELSLDKREQILQSWSREKRLVPLRIAFLIIKITFFYNLFSRVTLLTILKSQNLQSNLTVVLFINTAPRAIDQNGNNPTWEAIKYKVDKREKLKLKKRPLEKGVIETRLENDTTILQSLAEKGLQVSENAENNTYKIKCDVVVVGSGSGGGVAAAVLASSGLKVVVLEKGNYFVPKDYSSLEGPSFNELYESGGILSTLDGKMMVMAGSTVGGGSAVNWSASVKTPNSVLKEWSQCYKIPLFGSSTYQSAMEAVWRRIVIITGCKAEQFILEDRNNGIRTKKCLGVIATTLKSKVSRKLQIESKRMKCKGVREEDVEEFLDKVIVVGGPRSRDELWTMYATAHQMGSCRMAPTQEQGALDLNGQSWEAKDLYVCDGSVLPSAIGVNPMITIQSTAYCIANNIAESFKKDK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1213 523 Gene3D - 246 365 IPR036188 -
Lele06g1213 523 PRINTS Pyridine nucleotide disulphide reductase class-I signature 253 275 - -
Lele06g1213 523 PRINTS Pyridine nucleotide disulphide reductase class-I signature 371 380 - -
Lele06g1213 523 Pfam GMC oxidoreductase 452 510 IPR007867 GO:0016614
Lele06g1213 523 Gene3D - 433 519 IPR036188 -
Lele06g1213 523 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 172 371 - -
Lele06g1213 523 PRINTS FAD-dependent pyridine nucleotide reductase signature 254 273 - -
Lele06g1213 523 PRINTS FAD-dependent pyridine nucleotide reductase signature 368 386 - -
Lele06g1213 523 PRINTS FAD-dependent pyridine nucleotide reductase signature 435 453 - -
Lele06g1213 523 Pfam GMC oxidoreductase 253 369 IPR000172 GO:0016614|GO:0050660
Lele06g1213 523 SUPERFAMILY FAD/NAD(P)-binding domain 249 518 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1213 Lele-ChrLele06 7630045 7633196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1213 222 520 Acyl Lipid Metabolism Gene Families AT4G28570 35.103 1.87e-40 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1213 06 7630045 7633196 Lele06g1213 06 7630045 7633196 ECH
Lele06g1213 06 7630045 7633196 Lele07g1412 07 8568420 8571254 hybridization
Lele06g1213 06 7630045 7633196 Lele08g1211 08 7626145 7631218 hybridization