Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1103 ATGGTACGAAACCAGCTTTTCAGTGCCTCGCTTGCTTTCCCTGAATGCCAACCTGCTCTTCCATCCTTCCGATTTCCGAGTGGGAACCGTTCAATGCACTTAGTGGGTAGCCTGAGGAGAGCCGGTCCTTGGAAAACAGGTTCGCATTTTTCTCCCTCTCTTCTCATGAGATTACTCTGTCAAGAAACTAATGCCTGTGCCGTTGTCCTTGCGTCTGCTGATAATGAGGTTAAAGTCCGAGATCATGAGTTTTGCCAGGTTGGACGTAGTCTAGGAGAGAATGGGTCGGTGATGCCGGGTTACGATGAAAAGTCTTGTGGAACCGGACGAGAGGGTTTTGATAAAGATACTGAAGTCGTGCGTAGAGCAAATGATATGGAGACAGGGGCAGAGCTTGTTGGCGGAGTTATCAGAACTGATAAATGCGTGGATTCTGAATTAAACTATGGCGTTGTGAATGAGCTGCAGTATGAGTACAAGAGTGGAGTTACTGAATATGGCTCAATTGGCATTGAATTTAAATTATATAAGGAGGCTCAAGCAGAGGAGAACAAGATCGAGTTCCGTAATGCGGACCAAAATGCTAAAGAAGATTTTGTTGATGGAGAGAATGGAAGCGGGCAGAAGTGTCATGTTGATGAGTTAGCAGACCAGGGAGCTGTCACATTTATGGGAGATGAGAACAATGTCAAAGCTGCTGATGATAAGGTTTATACGGATGGTCCTAATGATTATTGTGCCTCAAGAACTGCTGAATCTGGGTGCCAATTGCTTGATGGCATTGTACATATGGAGGCCGAGCACGTCAATTTCAAGGAATCTTTGCATCATGAATTCCCAATTTCAAGAAATCAGCTTTGTCAGGTAGAAACTTTATATCTTTTGAAACAGCCATCCCTTGAAGTTTGTGCACAACCAGAGGGGATAAGAAGCCAGACCATGGACATCAACTTGTCAGAAGCATTGCCCTTGGGAAATATTCAAAAAGAGTGCCATGGTCTTAATCTTGTTGTAGATTTTAATTCATCCAGAAAGTTGGTGGAGGTTGATATGAATATGAGATCAGTGTCTTCAGAATTCTGTGTGTCTGATTTAGTATGGGGTAAAGTGAGGGGTCATCCGTGGTGGCCTGACCAAATCTTTGATCCTTCAGCTGCATCCAAAAAGGCAAAGAGGTATTTTAAGAAGGAAAGTTATCTGATAGCATATTTTGGGGATCAAACATTTGCTTGGAACGACGCATCAAAGATAAAGCCATTTCAAATGTATTTCTCACAAATGGAGAAACAGAGCAATTTGGATAAATTTTATCATGCTGTTGATTGTACATTGGATGAGATCTCAGGACGAGTTGAGTTTGGCTTATCCTGCCCCTGCATGCCTGAATGGTTCACCTATATTAAGACCCAAATAATCACTAGCACTGGGATCCAGGAACACGCAAGCAGAAGAGATGGTGGGGACAGGTTTCTGAATGCAGTCACTTTTGAACCCAAGAAACTTGTCAACTTTGTTAAATTCTTAGCGGAGTCACCACTTGTTGAATTTGATAGATTGGATTTTGCAATAGCACGTGCCCAATTGTTGGCCTTCCGCCATTCAAAGGGTGATTCTCATCTGTCTGAGTTTGTAGTGGATGATGCGTTGTTCAAGAATGATATGGCACTTATACCCATGGACTTGGAGGAAAAAGGGAAATATGATTATCAAATTGATAGTCAAGGATTGGAAACTGATATTGGCTATTCACACAAACGAAAGCACATCTCTAGAATAGATTGCGTGTGGCCCTGCAAGAAACAAAAATGTTTGTCTGATTTGATGTCTGAGAAGTGTTTGCGTCTCCCAAATGACAAGCATGTTTTAGAGGGAGGATTTTCTGCCTGTGAATCCTACTGGGATGCTCCCTCTTTCAAGCCGCAAGCAGCTGCTGATGGTAAGGAACGTTTTGATGAGGGCTCTAAGGAAGATACCTGCCCAACAGCCCTGATTATTGAATTCAGAAACTTGGATTCTATTCCTTCAGAAGCAAACCTCAACAAAATTTTTGGCCGCTTTGGACCCTTGGTCGAATCACAGACCGAACTAATAAAGAAGGGTAGATATGCCAGAGTGGTTTTCGAAAGACTTTCTGATGCACAAAGTGCTTTCAGCAGCGCTGGGAAATATAGCACTTTTGGACCTTCACTTTTTAGATACCACCTCGAGGTTATGCCTTCATCATCCAAAGCCCCTGTTGATGCAGGAAAGTTCAAGCTGATAGGACAGTATCAACCTTTTTCTAAAAACCAATGCACATATGTTACTGTAGTTATCAGGTTTAGTGTGTTATGGAAACCAGAGGCTGTGAATCTTCTGACTACTTCATTTTGCTGGTATTACCGGCCAGTAAATCATCTGACGTAAAACCAAGAGCATGCACAGTTGTTAGACACCCCAAACTCAAAAACGTTTGAGGACGCATCCAGCAAACTTAAAGAGTGGGAGCAAGAGCCTCGGCCAAATGAAACCTTTGAAATGGGAAAGACAAAGAAAAGCAAGTGCAATTTGCGTAAAAGTTTAGCTTGGGATAGTGCTTTCTTCACAAGTGCTGGTGTTTTGGATCCTGAGGAGTTGTCTAGCATAATTGAAGGTGTAGAGAAGGAAGAAAAGCATGCATTACCTGGAATTAAGGAGGATTTATCCATGTCTTGTTTGATGTGTGTAACCAAGCTTTCTTCTAGCGTTTCACCTGCTAGCTCTATCAGTGACTGGTCTTCAGAGTCCTCTTCATCAACTTGTATGAGTAAAAGTAGGTCTAATAGTTCAAGGACTAGCGTGGATAGTAGCTCTTGTAGAAAGGTCTTGTCAGACACTGATACACGACAAGTTTCTAGTTCCCTGAATTCTCCAAGTGATTCAAGCTTGGAAGGGCAGGAGAGTCAGTTGACTGGGTCTGTCAGTCAGTGTGCGAGGTCCGTTTCTGCGGGAACAGTTCCTCCATCAGCACCCGCGAAACCATCGGGCCTTCGAATGCCTTCACCAAAGATTGGCTTTTTTGATGGGATGAAATCGTCAGGGCGCACCCCTCGTGGAGGAATGCCGTCGCACTCTGTTGTACCCAGTGGCTTGCCCCGGGGAAGTATTGTCGGTCCAAGTGAAGGCCAAAACAAAGTAAACCGTGGAAAAATTCAGCCAGCTAGATCTAACGTGTCAATAAAAAACGCACAACCCAATAACCAGCAAACTTCACAACTAAATCCTGTTCATGAATCATTGGGTGTAGCGGTTATGAGGTCTAGCGCTTTGCAGAATGTTGAAAGCTCCTCTGAGATGTCCATGGAAGTTCCAAATAAGACTGTTCTTGAAAGCACTGCCGGAAACATAAGTAACATGACTGAAGGACATCCCGTAGGAATGCAAGATCTCAATCCTGGTTTGACACAGAACATTGGAACTGCGGATGAAAAGCCTAATAAAAGTGATGCTAGTTCTACTCGTGATGTTGAAAATTCATCTCGTGAAATTGTTGGGGAAGGCCCTAAATGTGGCAAAGTTGATCTCCCGAAGACTGAAGGTCCTGTTCTTCACGAACCAATGGACATTTCCATGGATAAACTGATTCCAGAAGGTACTAATAACATGCCTTCATTGAATAGCATAGACAACATTCTTAAGGTCGGAGAACATAATCCAAGCATTTCAAGTGAAACGGAAATTGATAGTTTGAGCTGTCAACTTGGACTTACGTATATAAATACGAAGATAAAGAAAAACTCCGATGTCAACTCCCAAGATAATGTTGATATTGTGGAGTTATCTAGTGGCAAGGAGCATCTTGATTGTCCTAAAGGGGAAGAATCCTTCGATGGTCCAAATTCCCGTGGTCCATATTCACCTGCTCACACAAGGAGACCCTTCGCTGTGAAAGACTCCTTTTGCAATATGGATGGCTCGTTCAGAGTTTCTACGGAATTGTCAGTTGCAGAGGCTATTGAATAG 3981 0.431 MVRNQLFSASLAFPECQPALPSFRFPSGNRSMHLVGSLRRAGPWKTGSHFSPSLLMRLLCQETNACAVVLASADNEVKVRDHEFCQVGRSLGENGSVMPGYDEKSCGTGREGFDKDTEVVRRANDMETGAELVGGVIRTDKCVDSELNYGVVNELQYEYKSGVTEYGSIGIEFKLYKEAQAEENKIEFRNADQNAKEDFVDGENGSGQKCHVDELADQGAVTFMGDENNVKAADDKVYTDGPNDYCASRTAESGCQLLDGIVHMEAEHVNFKESLHHEFPISRNQLCQVETLYLLKQPSLEVCAQPEGIRSQTMDINLSEALPLGNIQKECHGLNLVVDFNSSRKLVEVDMNMRSVSSEFCVSDLVWGKVRGHPWWPDQIFDPSAASKKAKRYFKKESYLIAYFGDQTFAWNDASKIKPFQMYFSQMEKQSNLDKFYHAVDCTLDEISGRVEFGLSCPCMPEWFTYIKTQIITSTGIQEHASRRDGGDRFLNAVTFEPKKLVNFVKFLAESPLVEFDRLDFAIARAQLLAFRHSKGDSHLSEFVVDDALFKNDMALIPMDLEEKGKYDYQIDSQGLETDIGYSHKRKHISRIDCVWPCKKQKCLSDLMSEKCLRLPNDKHVLEGGFSACESYWDAPSFKPQAAADGKERFDEGSKEDTCPTALIIEFRNLDSIPSEANLNKIFGRFGPLVESQTELIKKGRYARVVFERLSDAQSAFSSAGKYSTFGPSLFRYHLEVMPSSSKAPVDAGKFKLIGQYQPFSKNQCTYVTVVIRFSVLWKPEAVNLLTTSFCWYYRPVNHLTXNQEHAQLLDTPNSKTFEDASSKLKEWEQEPRPNETFEMGKTKKSKCNLRKSLAWDSAFFTSAGVLDPEELSSIIEGVEKEEKHALPGIKEDLSMSCLMCVTKLSSSVSPASSISDWSSESSSSTCMSKSRSNSSRTSVDSSSCRKVLSDTDTRQVSSSLNSPSDSSLEGQESQLTGSVSQCARSVSAGTVPPSAPAKPSGLRMPSPKIGFFDGMKSSGRTPRGGMPSHSVVPSGLPRGSIVGPSEGQNKVNRGKIQPARSNVSIKNAQPNNQQTSQLNPVHESLGVAVMRSSALQNVESSSEMSMEVPNKTVLESTAGNISNMTEGHPVGMQDLNPGLTQNIGTADEKPNKSDASSTRDVENSSREIVGEGPKCGKVDLPKTEGPVLHEPMDISMDKLIPEGTNNMPSLNSIDNILKVGEHNPSISSETEIDSLSCQLGLTYINTKIKKNSDVNSQDNVDIVELSSGKEHLDCPKGEESFDGPNSRGPYSPAHTRRPFAVKDSFCNMDGSFRVSTELSVAEAIE 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1103 1326 MobiDBLite consensus disorder prediction 1122 1190 - -
Lele06g1103 1326 SUPERFAMILY RNA-binding domain, RBD 660 742 IPR035979 GO:0003676
Lele06g1103 1326 SUPERFAMILY Tudor/PWWP/MBT 358 472 - -
Lele06g1103 1326 MobiDBLite consensus disorder prediction 1153 1168 - -
Lele06g1103 1326 SMART PWWP_4 360 421 IPR000313 -
Lele06g1103 1326 MobiDBLite consensus disorder prediction 1271 1296 - -
Lele06g1103 1326 Gene3D - 348 452 - -
Lele06g1103 1326 CDD PWWP 364 446 - -
Lele06g1103 1326 Pfam PWWP domain 364 442 IPR000313 -
Lele06g1103 1326 MobiDBLite consensus disorder prediction 1122 1152 - -
Lele06g1103 1326 MobiDBLite consensus disorder prediction 920 989 - -
Lele06g1103 1326 MobiDBLite consensus disorder prediction 920 1053 - -
Lele06g1103 1326 PANTHER ALDOLASE-RELATED 132 630 - -
Lele06g1103 1326 ProSiteProfiles PWWP domain profile. 362 423 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1103 Lele-ChrLele06 6858041 6867580 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1103 06 6858041 6867580 Lele06g1103 06 6858041 6867580 ECH
Lele06g1103 06 6858041 6867580 Lele07g1283 07 7764467 7768387 hybridization
Lele06g1103 06 6858041 6867580 Lele08g1090 08 6869844 6872003 hybridization