Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0662 ATGGGTTTGGCCTCAGTGTTTGTCAGGCCTCTCGTTACTCCGGTCGCTATTGATCTTCACACGAAGAGCACAACTGCTGAAAATGCGTGGGAGAGTTTCGGACGTAACAAGTCGGTAAAGTCGAAGTCAAGCCGACTGAAGGTGTTCAGACTGAATTGTTCACTCGATAGGGATACAATTGTGAGCACATCGGTTTTGGCGGACAGTATTGCGGAGTGCTCAAGTGAAGAACAGACCAAGGAGCCTAGTCTTTCTACCGCGTTACTGAATTTCGACAATGAGTTTGATCCTTATGGAGCAATCAGTACGCCAATTTACCAAACTGCTACTTTTAAGCAGCCTTCTGCAATAAAAAATGGTCCTTATGACTATACTAGAAGTGGAAATCCTACCCGAGATGCTTTGGAAAGGTTACTGGCAAAGCTTGACAAAGCAGAAAGAGCCTTTTGCTTCAGCAGTGGAATGGCTGCTCTGAATGCTGTTAGCCAGCTTGTTGGAACTGGTGAAGAAATTGTTGCTGGAGATGATCTATATGGTGGTTCAGATAGACTATTATCCCAAGTAATTCCAAAGTCTGGGGTCATAGTGAAACAAGTAAATACAAGTGATCTAGAGGAGGTGGCCTCTGCTATTGGACCTACTACTAAGTTGGTGTGGGTGGAGAATCCCACCAATCCTCAGATACAAATACCTGATATTCGAAAAATAGCGGAGATGGCCCATGCACATGGTGCTTTTCTATTGGTAGACAATACCATGATGTCTCCTGTCTTGTGCCAGCCACTGGAACTTGGAGCAGATATTGTTATGCATTCAGCTACTAAATTTATTGGCGGACATAGTGCTATCATTGCTGGTGTCCTTGCTGTTAAATGCGAAAGGTTGGGAAAAGATTTGTATTTATTACAAAATGCCGCCGGTTCAGGCTTAGCTCCGTTTGACTGTTGGCTCTGTTTGCAAGGAATCAAAACAATGGAACTGCGAGTTGAGAAGCAACAGGAGAGTGCACAAAAGATTGCTGAGTTTCTTGCCTCCCATCCTCGAGTTAAGAAGGTAAACTATGCTGGTCTTCCTAGTCATACTGGACATGACCTGCACTACTCTCAGGCAAAGGGGGCAGGATCTGTGCTTAGCTTTTTGACAGGCTCAGTGGCACTCTCAAAGCATGTCGTTGAAACTACCAAATACTTTAGCATTGCTGTCAGTTTTGGGAGTGTAAAGTCACTTATAAGCATGCCCTGCTTTATGACTCATGCTGCCATACCTGCCGCAGTCCGTGAGGCCAGAGGTTTACCTGAAGATCTTGTGCGTATTTCTGTGGGGATTGAGAATGTTGACGATCTTGTTGATGATTTAGATCAGGCACTCTCATCCGGGACTCTCTAG 1386 0.4495 MGLASVFVRPLVTPVAIDLHTKSTTAENAWESFGRNKSVKSKSSRLKVFRLNCSLDRDTIVSTSVLADSIAECSSEEQTKEPSLSTALLNFDNEFDPYGAISTPIYQTATFKQPSAIKNGPYDYTRSGNPTRDALERLLAKLDKAERAFCFSSGMAALNAVSQLVGTGEEIVAGDDLYGGSDRLLSQVIPKSGVIVKQVNTSDLEEVASAIGPTTKLVWVENPTNPQIQIPDIRKIAEMAHAHGAFLLVDNTMMSPVLCQPLELGADIVMHSATKFIGGHSAIIAGVLAVKCERLGKDLYLLQNAAGSGLAPFDCWLCLQGIKTMELRVEKQQESAQKIAEFLASHPRVKKVNYAGLPSHTGHDLHYSQAKGAGSVLSFLTGSVALSKHVVETTKYFSIAVSFGSVKSLISMPCFMTHAAIPAAVREARGLPEDLVRISVGIENVDDLVDDLDQALSSGTL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0662 461 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 267 281 IPR000277 GO:0019346|GO:0030170
Lele06g0662 461 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 84 457 IPR000277 GO:0019346|GO:0030170
Lele06g0662 461 CDD CGS_like 99 444 IPR000277 GO:0019346|GO:0030170
Lele06g0662 461 FunFam Cystathionine beta-lyase 325 458 - -
Lele06g0662 461 Gene3D - 83 325 IPR015421 GO:0003824
Lele06g0662 461 FunFam Cystathionine gamma-synthase homolog 82 324 - -
Lele06g0662 461 PIRSF CGS 71 459 IPR000277 GO:0019346|GO:0030170
Lele06g0662 461 TIGRFAM cysta_beta_ly_E: cystathionine beta-lyase 84 458 IPR006238 GO:0004121|GO:0071266
Lele06g0662 461 Gene3D Aspartate Aminotransferase, domain 1 326 459 IPR015422 GO:0003824
Lele06g0662 461 SUPERFAMILY PLP-dependent transferases 90 457 IPR015424 -
Lele06g0662 461 Pfam Cys/Met metabolism PLP-dependent enzyme 86 456 IPR000277 GO:0019346|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0662 Lele-ChrLele06 3967254 3971764 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0662 06 3967254 3971764 Lele06g0662 06 3967254 3971764 ECH
Lele06g0662 06 3967254 3971764 Lele07g0852 07 4927257 4933044 hybridization
Lele06g0662 06 3967254 3971764 Lele08g0657 08 4009340 4015052 hybridization