Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0500 ATGGAGAAGGCTGATGTAAGTGAGTATTATTTCTATATACCAGCTGTCTTAAGGGTTCCTAACCTACTTCAGGTTGTCAAAAGAAGAGTTGTCAAGAGCAATCTTAATAGGAAGAATATACTATATCGGGACTTCACTTGTCAGTATTGCTCTTCACGTGAGAATTTGACCATTGACCATGTTGTGCCCGCTTCACCGGGTGGAGAATGGAAATGGGAAAATCCAGTTACAGCTTGTGCCAAATATAACTCGAGGACAGGTCAAAAAACTTTAGAGGAGGCAAAAATGAAGCTGATCAAGACTCCCAAGGCACCGAAGGAGTTTGACATACATGCCATACTCCTAACCAGTGCAGCACTAAGAATGTTGACGGTAAGAAAGGGAGCGCCTGAAGAATGGCTTCAGTATCTATCAAGTGTTTTGCCGGTTGCCAGTGTTCATACATGTATACTGCGTATCATTTTTCTACGCTTGGAGACTTCGGGCGTTGTTACTTTGTCGCTTGCCGGCACAGAAACTCAGGAGACAAGACCCGTTGATTTGGACCTCATAACTTGGGATTTTGTGGGTGAAATTGGACCAGCAGAAAAAGATGAACAGTGTATCAGTCCTTGGGATAGCAGGCTGGGTCAAGGCCAAGGGGCGTTGTGGCCATGGACGTTTGCCGGAATGTATCCGTTTCCAGTGAGTGCAAGCAAGAGAAGGTTCTTCCCCCTTCTTGTTCAAAGCTTACTTCCTTCTCAACCAGCCTCGATGACCTCTTCTCTGCTCAGAACACGGTCAGTCGATATCTCCCCTGTTTTATGTTGGCTTTTTCACTCTGCTTCTGGCTCTGTTCTCCTTGAAATTCAATGGCCTAATAGTTCTTTTTTGAGTTTTATCATCTCGGAGGTGGATGTCGGATTGGAGTGGCTGTCAGTATTTGTGGAAGACTGCTTTTCAAGCCAAGCAAGCTGTCTCTTGGCACCTCCTGATGTTCATCATCAAGCTACAACAACAACAACCTCCGAACCTTCAAAACCATTGCAGAGACCTCACCAGAATGAGACTTCTCTGCAAAATTTTGCAGTGCCTGGAAAAGCCAGAAGCAAAAGGAAGAGACTTTCAGCTCCGAGAGCCAAAGACCCCTTAAGCATATGGTCAGATCATTTAAACCCACAAAACGAAGCCATAAGCTCAGACCCTCCTCTGCTCAAACAAACTTACTGGTTAGCAGACAGCGAACTCATGGTCCCAAACAAGAAAGAGAAGGGAGAAGAAAGCAAAGAGGAAGAAGAAGAAGAAGAGAAGATGATGGTGGTGGTGGTGAGGAAGGAGTCGGAGAGTGAGGTCCGCAATGAGCAAAATGTTATGCCAAGGAGAGCATGTGGAGTGGGGCGTTATTTGAATTTGGCAGTTGGCATGCACTATCGCAGAGAAGATAAGATAATGCATTTCGATATGCAGGGTTGGCTAATGATAATAGGGAGTTTGGAGGATGTGGAAAGGGAAAGTGTAAAGTAA 1503 0.4518 MEKADVSEYYFYIPAVLRVPNLLQVVKRRVVKSNLNRKNILYRDFTCQYCSSRENLTIDHVVPASPGGEWKWENPVTACAKYNSRTGQKTLEEAKMKLIKTPKAPKEFDIHAILLTSAALRMLTVRKGAPEEWLQYLSSVLPVASVHTCILRIIFLRLETSGVVTLSLAGTETQETRPVDLDLITWDFVGEIGPAEKDEQCISPWDSRLGQGQGALWPWTFAGMYPFPVSASKRRFFPLLVQSLLPSQPASMTSSLLRTRSVDISPVLCWLFHSASGSVLLEIQWPNSSFLSFIISEVDVGLEWLSVFVEDCFSSQASCLLAPPDVHHQATTTTTSEPSKPLQRPHQNETSLQNFAVPGKARSKRKRLSAPRAKDPLSIWSDHLNPQNEAISSDPPLLKQTYWLADSELMVPNKKEKGEESKEEEEEEEKMMVVVVRKESESEVRNEQNVMPRRACGVGRYLNLAVGMHYRREDKIMHFDMQGWLMIIGSLEDVERESVK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0500 500 SMART HNH_5 35 84 IPR003615 -
Lele06g0500 500 MobiDBLite consensus disorder prediction 329 372 - -
Lele06g0500 500 MobiDBLite consensus disorder prediction 329 357 - -
Lele06g0500 500 PANTHER SLL1193 PROTEIN 7 138 - -
Lele06g0500 500 Pfam HNH endonuclease 47 97 IPR029471 -
Lele06g0500 500 CDD HNHc 37 85 IPR003615 -
Lele06g0500 500 Gene3D - 24 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0500 Lele-ChrLele06 3041915 3050753 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0500 06 3041915 3050753 Lele06g0500 06 3041915 3050753 ECH
Lele06g0500 06 3041915 3050753 Lele07g0713 07 4036201 4041585 hybridization