Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0426 ATGCACTACCAGACGGCGGCGTCGTGGGGGGGCTATGTGACGGCGGTGGCTGTGGGAGACCCACTGGAGAGGATAGAGAGGATGGCGTCGGAGAATGCGGTGGTGATATTCAGCGTGAGCACGTGCTGCATGTGCCACGCCATTAAGAGTCTCTTCTGCGGCATGGGAGTGAACCCCACGGTGTATGAGCTTGACGAGGACCCCAGAGGGAAGGAGCTCGAGAGGGCCTTGATGAGGCTTCTCGGCTGCTCCTCCGTCCTGCCGGTGGTCTTCATTGGAGGAAAGCTCGTCGGAACCATGGACAGAGTCATGGCCTGCCACATCAATGGCACTCTCGTCCCTCTCCTCAAAGAAGCCGGCGCCCTCTGGCTTTAG 375 0.6027 MHYQTAASWGGYVTAVAVGDPLERIERMASENAVVIFSVSTCCMCHAIKSLFCGMGVNPTVYELDEDPRGKELERALMRLLGCSSVLPVVFIGGKLVGTMDRVMACHINGTLVPLLKEAGALWL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0426 124 Pfam Glutaredoxin 34 97 IPR002109 -
Lele06g0426 124 FunFam Glutaredoxin family protein 22 123 - -
Lele06g0426 124 SUPERFAMILY Thioredoxin-like 22 123 IPR036249 -
Lele06g0426 124 TIGRFAM GlrX-like_plant: glutaredoxin-like family 25 124 IPR011905 -
Lele06g0426 124 CDD GRX_GRXh_1_2_like 33 115 - -
Lele06g0426 124 ProSiteProfiles Glutaredoxin domain profile. 22 123 - -
Lele06g0426 124 Gene3D Glutaredoxin 19 123 - -
Lele06g0426 124 PANTHER GLUTAREDOXIN 23 124 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0426 Lele-ChrLele06 2614979 2615353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0426 1 124 Miscellaneous Gene Families AT3G02000 61.314 5.30e-48 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0426 06 2614979 2615353 Lele06g0426 06 2614979 2615353 ECH
Lele06g0426 06 2614979 2615353 Lele07g0638 07 3635642 3636016 hybridization