Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0220 ATGAGTCGTCATCCTGAGGTTAAGTGGGCTCAGAGGGTTGACAAGGTCTATATAACAGTGCAATTGCCAGATTCCAAGAATGCCAAAGTAGATCTAACTCCTGATGGCGTTTTTACTTTCTCTGCTAGTGCTGGTGCCAAAGAGCAACTCTATGAGTCAAAATTAGAGCTTTTTGACAAAGTGAATGTAGAGGAGAGCAAAATTAATATAGGAGTCAGAAACGTATTCTGTGTTGTGCAAAAGGCAGAGAGTGGATGGTGGAAAAAGTTACTGCGTGGAGAAGGCAAGGTTCCACATTATGTAAAAGTAGATTGGGACAAATGGGTGGATGAGGATGATGATAATGGAGGAGGACTTGGTGACTTGGACTTGGGAGGGATGGACTTCTCGAAATTTGGCGGGATGGGTGATGATGCTATGGGTGAAGATTTTGAAGAGAGCGATGATGAAGAGCAAGAAGTGCCAAAGCCTAGTGGCGAACACGAGACTGACAAGGCCGTGGAGGAAACCGCGGAGAAACATGAAGTTGCTTCAAGCACATAA 543 0.4475 MSRHPEVKWAQRVDKVYITVQLPDSKNAKVDLTPDGVFTFSASAGAKEQLYESKLELFDKVNVEESKINIGVRNVFCVVQKAESGWWKKLLRGEGKVPHYVKVDWDKWVDEDDDNGGGLGDLDLGGMDFSKFGGMGDDAMGEDFEESDDEEQEVPKPSGEHETDKAVEETAEKHEVASST 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0220 180 MobiDBLite consensus disorder prediction 139 153 - -
Lele06g0220 180 ProSiteProfiles CS domain profile. 2 91 IPR007052 -
Lele06g0220 180 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 1 163 IPR045250 GO:0051879
Lele06g0220 180 SUPERFAMILY HSP20-like chaperones 1 145 IPR008978 -
Lele06g0220 180 MobiDBLite consensus disorder prediction 133 180 - -
Lele06g0220 180 FunFam Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 121 - -
Lele06g0220 180 CDD p23_hB-ind1_like 5 109 - -
Lele06g0220 180 Pfam CS domain 6 81 IPR007052 -
Lele06g0220 180 Gene3D - 2 119 IPR008978 -
Lele06g0220 180 MobiDBLite consensus disorder prediction 154 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0220 Lele-ChrLele06 1339536 1342051 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0220 06 1339536 1342051 Lele06g0220 06 1339536 1342051 ECH
Lele06g0220 06 1339536 1342051 Lele07g0423 07 2381597 2384143 hybridization
Lele06g0220 06 1339536 1342051 Lele08g0226 08 1359594 1363878 hybridization