Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0102 ATGGATGCTGCAGCTCGCATGACCGATGGATCCAAGTACGAGTGCTTGCTTTTCGATATGGATGACACCCTCTATCCACTGAGCTCAGGTCTCAATATGGCATGTCGGAAGAACATACAAGACTATATGTTGGAACGCTTGGGCATTGAAGAAAGTCAGGTTCCAAAGATGTGCCTGGATTTGTACATAGAATACGGGACCACTATGGCTGGACTTAAGGCGATTGGTTATGAATTCGACAACGATGAGTTCCACGCTTACGCGCATGGAAGATTGCCATATGATAAGTTGAAGCCCGATCCTGTGTTAAGGAATCTCCTGCTTTCCATGCCTCAGCGTAAAATAATTTTCACCAATGCAGATCAAGCACATGCAATTCAAGTTCTCAAGAGACTGGACTTAGAAGATTGTTTCGAGGGCATTATATGCTTTGAAACGTTGAATCGTCCTAAAAATTTCAAGAATGTTGATGACATGGCAGAAAATGGAGGTTTCAGCTCCAAGTCACGAATACTCTGCAAGCCCTCCGTGGAGGCCATCGAAGCTGCTATTCGGATCGCGAACGTGGGTCCTAAGAAAACAATTTTCTTCGATGACAGTGCTAGAAACATTGCAAGTGGAAAAGTAGCTGGACTTCACACAGTTATCGTGGGGTGTTCAGATTTGGTGCCAGGAGCAGACCATGCTCTGAGAAGCATCCACAATATCAAAGAAGCATTACCAGAAATATGGGAGCCAGAAGAAGGAGACGAACAGAAAGTGCTCAAATTGCAAGCAGTTGCCACCATGGTCCAAGCATAG 801 0.4507 MDAAARMTDGSKYECLLFDMDDTLYPLSSGLNMACRKNIQDYMLERLGIEESQVPKMCLDLYIEYGTTMAGLKAIGYEFDNDEFHAYAHGRLPYDKLKPDPVLRNLLLSMPQRKIIFTNADQAHAIQVLKRLDLEDCFEGIICFETLNRPKNFKNVDDMAENGGFSSKSRILCKPSVEAIEAAIRIANVGPKKTIFFDDSARNIASGKVAGLHTVIVGCSDLVPGADHALRSIHNIKEALPEIWEPEEGDEQKVLKLQAVATMVQA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0102 266 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 14 217 IPR010237 -
Lele06g0102 266 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 172 217 IPR006439 -
Lele06g0102 266 CDD HAD_5NT 15 218 IPR010237 -
Lele06g0102 266 Gene3D - 76 244 IPR023214 -
Lele06g0102 266 SFLD C1.5.3: 5'-Nucleotidase Like 8 245 IPR010237 -
Lele06g0102 266 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 8 245 - -
Lele06g0102 266 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 9 252 - -
Lele06g0102 266 SUPERFAMILY HAD-like 7 243 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0102 Lele-ChrLele06 625333 627285 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0102 06 625333 627285 Lele07g0301 07 1653470 1656760 hybridization
Lele06g0102 06 625333 627285 Lele08g0103 08 610501 612888 hybridization